Acinetobacter lactucae: OTEC02_04860
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Entry
OTEC02_04860 CDS
T05220
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
alc
Acinetobacter lactucae
Pathway
alc03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
alc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
OTEC02_04860
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
alc03400
]
OTEC02_04860
DNA repair and recombination proteins [BR:
alc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
OTEC02_04860
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
OTEC02_04860
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
Helicase_C
UvrB
ResIII
UVR
DEAD
Kinesin
AAA_30
AAA_5
SWI2_SNF2
AAA_22
Microtub_bd
AAA_16
DUF87
Motif
Other DBs
NCBI-ProteinID:
ARD28155
UniProt:
A0A151YMV4
LinkDB
All DBs
Position
1017231..1019252
Genome browser
AA seq
673 aa
AA seq
DB search
MNENQPFDLVTHYQPAGDQPQAIEKLVNGIEHGFRNQLLLGVTGSGKTYTMANVIAQTQR
PTIVMAHNKTLAAQLYGEFKAFFPNNAVEYFVSYYDYYQPEAYVPSSDTFIEKDAAINDH
IDQMRLSATRALLERRDAIIVASVSAIYGLGDPNAYMQMLLHVVEGDRVSRDEIIRRLVE
MQYTRNELEFLRGTYRIRGEIIDIFPAESDQHAIRIELFDDEVDSIRWFDPLTGKMVRKV
PRVTIYPKSHYVTPKDHLTRAIDTIKDELQDQLKFFREHDKLLEAQRIEQRTRYDLEMMQ
QLGYTNGIENYSRHLSGRPAGEAPPTLFDYVPEDALLIIDESHVTVPQIGAMYKGDRSRK
ENLVNYGFRLPSALDNRPMKFEEWERIVPTTIFVSATPARYELEKSDQVVEQVVRPTGLI
DPEIEVRPVLTQVDDVLSEINIRKNLNERVLVTTLTKRMAEDLTSYLKEYGVKVAYLHSD
IDTVERVKIIHELRTGVFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSERSLIQTI
GRAARNIKGKAILYADRITDSMQKAIDETERRRAKQIEFNELHGITPRSAVRQVIKEIDS
GEVLSDDEIDEKVLEQAQALSADERHILSDPKLFSKHITKLEKEMLKASKDLQFEQAARI
RDEIIRLKAQMLQ
NT seq
2022 nt
NT seq
+upstream
nt +downstream
nt
ttgaacgaaaatcaaccttttgatttggtcactcattatcagccagcaggtgatcagcca
caggccattgaaaagctggtaaatggtatcgagcatggttttcgtaatcagttattactg
ggtgtaactggctcgggtaaaacctataccatggcaaatgtaatcgctcaaacacagcga
cctacaattgtgatggcccataacaaaacattggctgctcagctttatggagagtttaaa
gcgttctttcccaataatgcggttgagtatttcgtaagttattatgattattaccaacca
gaggcttatgtcccatcttcagatacttttattgaaaaagatgcggccattaatgatcac
atcgaccagatgcgactatcggcaacacgcgctttattagagcgtcgtgatgcaattatt
gtggcttcggtttctgcaatttatggtttgggtgacccaaatgcttatatgcaaatgtta
ttgcatgtggttgagggtgaccgcgtaagtcgtgatgaaattattcgtcgtttagttgaa
atgcaatatacgcgtaatgaacttgagttcttacgtggtacatatcgaattcgcggcgaa
attattgatattttccctgccgaatctgatcaacatgcgattcgtattgaactatttgat
gacgaggttgattccatccgttggtttgatccgctaaccggtaaaatggttcgtaaagtt
ccacgtgttacgatttatccaaaaagtcactatgtaacgccaaaagatcatctgactcgt
gccattgatacgattaaagacgaactacaggatcaacttaaattcttccgtgaacatgac
aaattgctggaagcccagcgtattgagcagcgcacccgctatgatctagaaatgatgcaa
cagttgggttataccaacggcatcgaaaactattcgagacatttgtcgggccgtccagct
ggtgaagcgcctccaactttatttgattatgtacctgaagatgcgttacttattattgat
gagtcacacgttactgttccccaaattggagcaatgtataaaggtgaccgatcacgtaaa
gaaaatttagtgaattatggtttccgtttaccaagtgcacttgataatcgaccaatgaag
tttgaagagtgggagcgcattgtaccgacgaccatttttgtaagtgcgacgccagctaga
tatgagctagaaaagtctgaccaagttgttgagcaagtggtacgtccaacaggactaatc
gatcctgaaattgaagttcgtcctgtattaactcaagttgatgatgttctttctgagatt
aatattcgtaagaacctaaatgaacgtgtgttagtgaccactttaacaaaacgtatggca
gaagacctcacttcttatttaaaagaatacggggttaaagtcgcttatttacactcagat
attgatacggttgaacgtgtcaaaattattcatgagttacgtacaggtgtgttcgacgtt
ctcgttggtattaacttactacgtgaaggtctcgacatgccagaagtttctttagttgct
attttagatgcagataaagaaggttttttacgttcagagcgttcactcattcaaacgatt
ggccgagctgcgcgtaacataaaaggtaaagcaattttatatgctgaccgaattactgat
tctatgcaaaaagccatagatgagactgagcgccgtagagctaaacaaatcgagttcaac
gagttgcatggtattacgccacgtagtgctgttcgtcaggtcatcaaagaaattgattca
ggtgaagtactttcagatgatgagattgatgagaaggtccttgaacaggcacaagcttta
agtgcggatgaaaggcatattctctctgatccaaaattgtttagtaagcatattactaag
cttgaaaaagagatgttaaaagcttcgaaagatttgcagtttgaacaggcagcacggata
cgtgatgaaatcattcgactaaaagcgcaaatgttgcaataa
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