Acinetobacter lactucae: OTEC02_06810
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Entry
OTEC02_06810 CDS
T05220
Name
(GenBank) RNA chaperone Hfq
KO
K03666
host factor-I protein
Organism
alc
Acinetobacter lactucae
Pathway
alc02024
Quorum sensing
alc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
alc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
OTEC02_06810
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
OTEC02_06810
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
alc03019
]
OTEC02_06810
03036 Chromosome and associated proteins [BR:
alc03036
]
OTEC02_06810
Messenger RNA biogenesis [BR:
alc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
OTEC02_06810
Chromosome and associated proteins [BR:
alc03036
]
Prokaryotic type
Nucleoid associated proteins
Other nucleoid associated proteins
OTEC02_06810
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hfq
LSM
Hfq_1
Motif
Other DBs
NCBI-ProteinID:
ARD28494
LinkDB
All DBs
Position
1447395..1447922
Genome browser
AA seq
175 aa
AA seq
DB search
MELKMSKGQTLQDPFLNSLRKERIPVSIFLVNGIKLQGHIESFDQYVVLLKNTVSQMVYK
HAISTVVPARNPRPAGAQGTGFPAQGGTQGGFGGQGSGFGGGQGGGFGGAQGGFGGAQGG
FGGQGGFGGQGGGFGGQGGFGGQGGFGGQGGFGGHQGGFDNDTKFEDGQDDENNR
NT seq
528 nt
NT seq
+upstream
nt +downstream
nt
ttggagttaaaaatgtctaaaggtcaaactttacaagatccgttcttaaattctctccgt
aaagaacgtatccctgtttctattttccttgtgaacggtattaaattacagggtcatatt
gaatcttttgaccaatatgttgttttattaaaaaatactgtaagtcaaatggtttacaaa
cacgcaatttcaactgttgttccagcacgtaacccacgtccagcaggcgctcaaggtaca
ggcttcccagcacaaggcggcactcaaggcggttttggtggtcaaggtagcggctttggc
ggcggtcaaggcggtggcttcggtggtgctcaaggcggcttcggtggcgctcaaggcggc
ttcggtggtcaaggcggcttcggtggtcaaggtggcggcttcggtggtcaaggcggcttc
ggtggtcaaggcggcttcggtggtcaaggcggtttcggaggtcatcaaggtggttttgac
aacgacactaaatttgaagatggacaagacgacgaaaataatcgttaa
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