Acinetobacter lactucae: OTEC02_13610
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Entry
OTEC02_13610 CDS
T05220
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K14159
ribonuclease HI / DNA polymerase III subunit epsilon [EC:
3.1.26.4
2.7.7.7
]
Organism
alc
Acinetobacter lactucae
Pathway
alc03030
DNA replication
alc03430
Mismatch repair
alc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
alc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
OTEC02_13610
03430 Mismatch repair
OTEC02_13610
03440 Homologous recombination
OTEC02_13610
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
alc03032
]
OTEC02_13610
03400 DNA repair and recombination proteins [BR:
alc03400
]
OTEC02_13610
Enzymes [BR:
alc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
OTEC02_13610
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.4 ribonuclease H
OTEC02_13610
DNA replication proteins [BR:
alc03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
OTEC02_13610
RNase H
OTEC02_13610
DNA repair and recombination proteins [BR:
alc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
OTEC02_13610
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_H
RNase_T
Rv2179c-like
DNA_pol_A_exo1
RVT_3
Motif
Other DBs
NCBI-ProteinID:
ARD29728
LinkDB
All DBs
Position
2867442..2868821
Genome browser
AA seq
459 aa
AA seq
DB search
MSQTITLYVDGACRGNPGLGGWGAYVITEQGEHKLFGGEPDTTNNRMELTAAIEGVSFCP
AEAHLIIWTDSNYVKQGITEWIHGWKKKNWKDVKNPDLWQKLDAVCAGRNIEWNWIKGHA
GHPGNEMADQLANLGADKTAKELKQPQSAAVSQDIKKPEQDWLLDDPFGFDLADASEEEN
IHLEASEEVEMIIVDEEIIEVETAEQESKQPTNNIHPQIVVTEAKLRLQGPRQLILDTET
TGFYFQDGDRIIEVGAIEMINRKLTGSSIHIYINPQKPVGDSENIHGISDDFLKDKPLYA
DIADTLFDYLKGAEIIAHNATFDMNFLDMEFKRVGLPALSEVCEVTDTLALAKNKHPGQK
NSLDALVRRYEIPARDRTFHGALLDAEILADVYLAMTGGQVSFDIDALSQSENSQQTTNR
SRVQIDLPVIEPSVEELNTHETWVKEYEEKHGEPCLFAK
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atgtctcaaacaatcacactgtatgttgatggtgcatgtcgtggcaatccgggtttaggt
ggttggggcgcatatgtcattactgagcagggtgaacataaattatttggtggtgaacct
gatacgactaataaccgtatggaactcactgctgccattgaaggtgtttcattttgccca
gccgaagcacatttgattatctggacagattcaaattatgtgaagcaaggtattactgag
tggattcatggctggaaaaagaaaaactggaaagatgtaaaaaatcctgacctttggcag
aaattagatgctgtctgtgcaggtagaaatattgaatggaactggattaaaggccatgca
ggacaccctggcaatgaaatggcagaccagctggcgaatttaggtgcagacaaaactgct
aaagaactcaagcaaccacagtctgccgctgtatcgcaagatataaaaaagcctgaacag
gactggttgctagatgaccctttcgggtttgatctggctgacgcaagtgaagaagaaaat
attcatcttgaagcatctgaagaagttgagatgattattgtggacgaagaaatcattgaa
gttgaaactgccgaacaagaaagtaagcagccaaccaataacattcaccctcaaatcgtt
gtgaccgaagccaaattaagattacaaggtcctcgacaactgattctcgatacggaaacc
actggtttttatttccaagatggcgaccgcattattgaggtgggtgcgattgagatgatt
aaccgtaagcttacgggtagctcgattcatatttacattaacccacaaaaaccagtggga
gattcagaaaacatccacggtatcagtgatgatttcttaaaagataaaccgctttatgca
gacattgctgacaccttatttgactatctcaaaggtgcagagattattgcccacaacgca
accttcgatatgaacttccttgatatggagtttaaacgcgtagggcttcctgcactttct
gaagtatgtgaggtaacggatactttagctttagcgaaaaacaaacatccgggacaaaaa
aactcccttgatgcgcttgtaagacgttatgaaattccagctcgtgaccgtactttccac
ggcgcattactcgatgctgaaattcttgctgatgtctacttggcaatgactggtggtcag
gtttcttttgatatagatgccttatctcagagtgaaaatagccaacaaacaaccaataga
agtagagttcaaattgaccttcctgtaattgaaccttcagttgaagagttaaatacacat
gagacttgggtcaaagaatatgaagaaaaacacggagaaccttgcctttttgcaaaataa
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