KEGG   Alcanivorax sp. ALC70: ASALC70_00171
Entry
ASALC70_00171     CDS       T09695                                 
Symbol
ytlP
Name
(GenBank) RNA 2',3'-cyclic phosphodiesterase
  KO
K01975  RNA 2',3'-cyclic 3'-phosphodiesterase [EC:3.1.4.58]
Organism
alca  Alcanivorax sp. ALC70
Brite
KEGG Orthology (KO) [BR:alca00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:alca03016]
    ASALC70_00171 (ytlP)
Enzymes [BR:alca01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.4  Phosphoric-diester hydrolases
    3.1.4.58  RNA 2',3'-cyclic 3'-phosphodiesterase
     ASALC70_00171 (ytlP)
Transfer RNA biogenesis [BR:alca03016]
 Prokaryotic type
  tRNA spricing factors
   Other tRNA splicing factors
    ASALC70_00171 (ytlP)
SSDB
Motif
Pfam: LigT_PEase 2_5_RNA_ligase2
Other DBs
NCBI-ProteinID: UWN47997
LinkDB
Position
complement(153337..153774)
AA seq 145 aa
MRCFIGIPVPADPGQALRDRPWAEGARAVPAADLHLTLAFLGERSYGWARSLWPALAAIA
AATPAFDLPLPTVDVFPRAGGRILAAWAERAPRLLALHGSIWRVLQDAGVEAETRRLLPH
VTLARLLAPAESCPVPGPGPCRCGS
NT seq 438 nt   +upstreamnt  +downstreamnt
atgcgctgtttcatcggcattccggtgcccgccgacccgggccaggccctgcgcgaccgg
ccgtgggcggagggcgcccgggcggtgccggcggcggacctgcatctgaccctggcgttt
ctcggcgagcggtcctacggctgggcgcgatcactgtggccggccctggccgccatcgcc
gccgccacgccggccttcgacctgccgctgccaacggtggacgtgttcccccgcgccggc
ggtcgcatcctggccgcctgggcggaacgagcgccacgcctgctggccctgcacgggtcg
atatggcgggtgctgcaagacgcgggcgtggaggcggagacacgtcgcttactgccccac
gtgaccctggcacggctgctggcgccggcggaatcctgcccggtgccgggccctggaccc
tgccggtgcgggagttga

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