Alcanivorax sp. ALC70: ASALC70_00799
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Entry
ASALC70_00799 CDS
T09695
Symbol
recB
Name
(GenBank) RecBCD enzyme subunit RecB
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
alca
Alcanivorax sp. ALC70
Pathway
alca03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
alca00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
ASALC70_00799 (recB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
alca03400
]
ASALC70_00799 (recB)
Enzymes [BR:
alca01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
ASALC70_00799 (recB)
DNA repair and recombination proteins [BR:
alca03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
ASALC70_00799 (recB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
UvrD_C_2
PDDEXK_1
AAA_19
Motif
Other DBs
NCBI-ProteinID:
UWN48613
LinkDB
All DBs
Position
763880..767383
Genome browser
AA seq
1167 aa
AA seq
DB search
MLGHGDEAAFPRPLLPPEILVVTFTEAATEELRERIRDRLAEAARAFAGDQGGGDPILDE
LLADYPDPDQRAAAARRLDAAAQWMDEAAIYTIHGFCNRMLKQHAFDSGSLFNLELNEDA
SEEQHRAACDYWRTVIGRFPAAAAPALRGAGLDGPEALLAAARPLFGHAGAATELPATVR
HWLDTAGPQRELEDRARATLATELPALRAWVSEALDNKWLNGNSYRASSVPAMLDALARY
AEGFPGTGRDDLKALERFSLDGLKLTKAGQDRLPELACFEALQRVLESRQDNALPRAALL
EHAAAWIEDRVAMMRRQTATMGFDDMLTRLRDALADAANGPRLARVIRAQFPVALIDEFQ
DTDPVQYRIFSTLYAGQPDIGWFMIGDPKQAIYAFRGADVHTYLAARADTESQHTLDRNY
RSAKAMVDAVNRLFEHGERLSGDVFLMDGRIPFQRVTAQGRKEHLEIDGAAHAGVTLWVE
DDDKAVSSGAYRHRQAERAAGEIAGLLNGAEDGHTGFRREDNAEFTPLRSRDIAVLVRDR
NEAAAIRQALAARRVRSVYLSDQDSVYATPEAADLLRLLSACAAPEADARVRSALACATL
DQPYAALDHLNRDERAWEAMVDRFHGYKHQWQRQGVLPMLRGLLLDFQVPERLSRTLDGE
RSLTNLLHLAELMQQAAGQLDGEQALIRHLREAVEDGGRGGDDSILRLESDDDRVRVITI
HKSKGLEYPLVFLPFICGFRPAETSKPPLRYHQDGELVVNLEPDDAAGALADRERLAEDM
RLLYVALTRARHACWLGLSPYARGNGKRNQLDGSAIGRLLFGPDGVANDGLSAALAPLDD
DAIRVTAPPRDNDTVHRPSDQERPWRGAARFSGRRAETWWIASYSALKQVEDDTLAPSDP
RGDRLAEHDGEAAPVADDIEPRGIHAFPRGPLPGLLLHDLLEQAGRDGFAATLAAPEELD
RRVQESLAARHWQDHESMLQDWWRAALRTPFDLGGDAAALADLPTAVPEMEFLFPARRVP
VEALDRLIRDHIAPGVPRPRLEADTLNGMLKGFIDLVFEHRGRYYVLDYKSNWLGPDDRA
YTRDTMTTAILESRYEVQYALYLLALHRLLRARLGPDYDPDRHLGGAVYVFLRGLNGPDA
GAVFERPATGLITALDELFVPGGHDAG
NT seq
3504 nt
NT seq
+upstream
nt +downstream
nt
gtgctcggccatggcgacgaggcggccttcccgcgcccgctgctgccgccggaaatcctg
gtggtgaccttcaccgaggcggccacggaggaattgcgcgagcgcatccgcgaccgcctg
gcggaggccgcccgcgccttcgccggcgaccagggcggcggcgacccgattctcgatgag
ctgctggccgactatccggacccggaccagcgcgctgccgccgcccgccgcctggacgcc
gccgcccagtggatggacgaagccgccatttacaccatccacggcttctgcaaccgcatg
ctcaagcagcacgccttcgactccggcagcctgttcaacctggaactcaacgaggacgcc
agcgaggaacagcaccgcgccgcctgcgattactggcgcacggtgatcgggcgcttcccg
gccgccgccgcgccggccctgcgcggcgccggcctggacggcccggaggcgctgctggcc
gccgcccgcccgctgttcggccatgccggcgccgccaccgagctgccggccacggtgcgg
cactggctggacacggcgggcccccagcgcgagctggaggaccgcgcccgcgccaccctg
gccaccgaactgccggccctgcgcgcctgggtcagcgaggccctggacaacaaatggctc
aacggcaacagctaccgggccagctcggtgcccgccatgctcgacgccctggcccgctac
gcggagggttttccgggcaccggccgggacgacctcaaggccctggagcgcttctccctg
gatggcctgaagctgaccaaggcgggccaggaccggctgccggagctggcctgcttcgag
gccctgcagcgggtgctggaaagccgccaggacaatgccctgccccgggccgcgctgctg
gagcacgccgccgcctggatcgaggaccgggtggcgatgatgcgccgccagaccgccacc
atgggcttcgacgacatgctcacccggctgcgcgacgccctggcggacgcggccaacggc
ccgcgcctggcgcgggtgatccgcgcccagttcccggtggccctgatcgacgaattccag
gacaccgacccggtgcagtaccgcatcttctccaccctgtacgccggccagccggacatc
ggctggttcatgatcggcgaccccaagcaggccatctacgccttccggggcgccgacgtg
cacacctatctggcggcccgggcggacaccgagagccagcacaccctggaccgcaactat
cgctccgccaaggccatggtggacgcggtgaaccgcctgttcgagcacggcgagcggctg
tccggggacgtcttcctgatggacggccgcatcccgtttcagcgcgtcaccgcccagggc
cgcaaggagcacctggaaatcgacggcgccgcccacgccggcgtcaccctgtgggtggag
gacgacgacaaggcggtgagcagcggcgcctaccggcaccgccaggcggagcgcgccgcc
ggcgagatcgccggcctgctcaacggcgccgaggacggccacaccggcttccgccgggag
gacaatgctgaattcaccccgctgcgctcccgggacatcgccgtgctggtgcgcgaccgc
aacgaggcggcggcgatccgccaggccctggcggcgcgccgggtgcgcagtgtttatctg
tccgaccaggattcggtgtacgccaccccggaggcggcggacctgctgcgcctgctgagc
gcctgcgcggcgccggaggcggacgcccgggtacgcagcgccctggcctgcgccaccctg
gaccagccctacgcggccctggaccacctcaaccgggacgagcgcgcctgggaggccatg
gtcgaccgcttccacgggtacaagcaccagtggcaacgccagggcgtgctgcccatgctg
cgcggcctgctgctggattttcaggtgccggagcggctgagtcgcaccctggacggcgag
cgttcgctcaccaaccttctgcacctggcggagctgatgcagcaggccgccggccagctg
gacggcgagcaggcgctgatccgccacctgcgcgaggcggtggaggacggcggccggggc
ggtgacgacagcatcctgcgcctggaaagcgacgacgaccgggtacgggtgatcaccatc
cacaaatccaagggcctggaatacccgctggtgttcctgcccttcatctgcggcttccgg
ccggcggaaaccagcaaaccgccgctgcgctatcaccaggacggcgaactggtggtcaac
ctggaaccggacgacgccgccggcgccctggcggaccgggaacggctggccgaggacatg
cgcctgctctacgtggccctgacccgggcccgccacgcctgttggctggggctgtcgccc
tatgcccgtggcaacggcaaacgcaaccagctggacggcagcgccatcggccgattgctg
ttcggcccggacggcgtcgccaacgacggcctgagcgccgccctggcgccgctcgatgac
gacgccatccgcgtcacggcgccgccacgggacaacgacaccgtgcaccgccccagcgac
caggaacggccctggcgcggcgccgcccggttctccggccgccgggcggaaacctggtgg
atcgccagctacagcgccctcaagcaggtggaagacgacaccctggcgccctccgatccg
cgcggcgaccggctggcggaacacgacggcgaggcggcgccggtggcggacgacatcgag
ccccggggcatccacgccttcccgcgcgggcccctgcccggcctgctgctccacgacctg
ctggagcaggccggccgcgacggcttcgccgccaccctggcggcgccggaggagctggac
cggcgcgtccaggagagcctggcggcgcgccactggcaggaccacgaaagcatgctccag
gactggtggcgggcggcgctgcgcacgcccttcgacctgggcggcgacgcggcggcgctc
gccgacctgcccacggcggtgccggaaatggagttcctgttcccggcccggcgcgtgccg
gtggaggccctggaccggctgatccgcgaccacatcgcgccgggcgtgccgcgcccacgc
ctggaggcggacaccctgaacggcatgctcaagggcttcatcgacctggtgttcgagcac
cggggccgctattacgtgctggattacaaatccaactggctggggcccgacgaccgcgcc
tacacccgcgacaccatgaccacggcgatcctggaaagccgctacgaggtacagtacgcc
ctctatctgctggccctgcaccgcctgctgcgcgcccgcctgggcccggactacgacccg
gaccggcacctgggcggcgccgtctatgtgttcctgcgcggcctgaacggcccggacgcc
ggcgccgtgttcgagcgcccggccaccgggctgatcaccgccctggacgaactgttcgta
cccggaggtcacgatgcaggctga
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