Alcanivorax sp. ALC70: ASALC70_00859
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Entry
ASALC70_00859 CDS
T09695
Symbol
ruvB
Name
(GenBank) Holliday junction ATP-dependent DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
alca
Alcanivorax sp. ALC70
Pathway
alca03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
alca00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
ASALC70_00859 (ruvB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
alca03400
]
ASALC70_00859 (ruvB)
Enzymes [BR:
alca01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
ASALC70_00859 (ruvB)
DNA repair and recombination proteins [BR:
alca03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
ASALC70_00859 (ruvB)
RecFOR pathway proteins
ASALC70_00859 (ruvB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
AAA_3
AAA_22
Mg_chelatase
nSTAND3
AAA_16
RNA_helicase
TIP49
AAA_14
Rad17
NTPase_1
ABC_tran
AAA_17
AAA_18
AAA_33
AAA_28
Sigma54_activ_2
AAA_24
NACHT
AAA_25
NB-ARC
Motif
Other DBs
NCBI-ProteinID:
UWN48671
LinkDB
All DBs
Position
complement(820840..821865)
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AA seq
341 aa
AA seq
DB search
MDNDRLIAADSVDSREDQQDRAIRPASLADYHGQPKVRERLEIFIDAARGRGEALDHTLI
FGPPGLGKTTLAHIIAREMGSELKTTSGPVLEKAGDLAAILTNLEDGDVLFVDEIHRLSP
VVEEILYPAMEDYQLDIMIGEGPAARSIKLDLPPFTLVGATTRAGLLTAPLRDRFGIVQR
LEFYSVDDLARIVARSCEILAIPVDEEGASEVARRARGTPRIANRLLRRVRDYAQVKGDG
RITGPVAESALDMLEVDSHGLDGTDRRLLNMMMHKFDGGPVGLDSLAAALNEDAGTLEEV
VEPYLIQQGFIQRTPRGRLVTNHAWRHFGLQVPAREGDLFK
NT seq
1026 nt
NT seq
+upstream
nt +downstream
nt
atggacaatgaccgcctgatcgccgccgattccgtggacagccgcgaggaccagcaggac
cgcgccatccgtcccgccagcctggcggactaccacggccagccgaaggtccgcgagcgg
ctggagatcttcatcgacgccgcccgcgggcgcggcgaagccctcgaccacaccctgatc
ttcggcccgccggggctgggcaagaccaccctggcgcacatcatcgcccgggaaatgggc
tcggaactgaagaccacctccggcccggtgctggaaaaagccggtgacctggccgccatc
ctcaccaacctggaagacggcgacgtcctgttcgtggacgagattcaccggctctcgccg
gtggtggaggagatcctctatcccgccatggaggactaccagctcgacatcatgatcggc
gaggggccggcggcccgctccatcaagctggacctgccgccgttcaccctggtgggcgcc
accacccgcgccggcctgctcaccgcgccgctgcgcgaccgcttcggcatcgtccagcgt
ctggagttctacagcgtcgatgacctggcgcgcatcgtcgcccgttcctgcgagattctc
gccatcccggtggacgaggagggcgccagcgaggtggcgcgccgcgcccggggcacgccg
cgcatcgccaaccgcctgctgcgccgggtgcgcgactatgcccaggtgaaaggcgacggc
cgcatcaccggcccggtggcggaaagcgccctggacatgctggaagtggacagccacggc
ctggacggcaccgaccgccggctgctgaacatgatgatgcacaaattcgacggcggcccg
gtggggctggactccctggccgccgccctcaacgaggacgccggcaccctggaagaagtg
gtggagccctacctgattcagcagggcttcattcagcgcaccccgcgcgggcgcctggtc
accaaccacgcctggcgtcatttcggcctgcaagtcccggcccgggaaggtgatttgttt
aaatga
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