Alcanivorax sp. ALC70: ASALC70_01100
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Entry
ASALC70_01100 CDS
T09695
Symbol
groL
Name
(GenBank) 60 kDa chaperonin
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
alca
Alcanivorax sp. ALC70
Pathway
alca03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
alca00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ASALC70_01100 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
alca03019
]
ASALC70_01100 (groL)
03110 Chaperones and folding catalysts [BR:
alca03110
]
ASALC70_01100 (groL)
03029 Mitochondrial biogenesis [BR:
alca03029
]
ASALC70_01100 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
alca04147
]
ASALC70_01100 (groL)
Enzymes [BR:
alca01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
ASALC70_01100 (groL)
Messenger RNA biogenesis [BR:
alca03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
ASALC70_01100 (groL)
Chaperones and folding catalysts [BR:
alca03110
]
Heat shock proteins
HSP60 / Chaperonin
ASALC70_01100 (groL)
Mitochondrial biogenesis [BR:
alca03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
ASALC70_01100 (groL)
Exosome [BR:
alca04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
ASALC70_01100 (groL)
Exosomal proteins of other body fluids (saliva and urine)
ASALC70_01100 (groL)
Exosomal proteins of breast cancer cells
ASALC70_01100 (groL)
Exosomal proteins of colorectal cancer cells
ASALC70_01100 (groL)
Exosomal proteins of bladder cancer cells
ASALC70_01100 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
DUF5891
Motif
Other DBs
NCBI-ProteinID:
UWN48910
LinkDB
All DBs
Position
complement(1047848..1049497)
Genome browser
AA seq
549 aa
AA seq
DB search
MAKEVLFRDSARQRMAKGVNTLADAVKVTLGPKGRNVVLEKSFGAPTITKDGVSVAKEIE
LEDKFENMGAQLVKEVASKANDEAGDGTTTATVLAQSIVNEGLKAVAAGMNPMDLKRGID
KATDAVVEQLKSLSTPCDNTKSIEQVGTISANSDKSVGEIIAQAMEKVGQEGVITVEEGQ
ALINELEVVEGMQFDRGYLSPYFINNNEKMQVELEDPYILLVDKKISNIRELLPVLENVA
KAGRPLMIIAEDIEGEALATLVVNNMRGIIKCAAVKAPGFGDRRKAMLQDIAILTGGTVI
SEEVGLSLENVSLEDLGSAKKVNIDKENTTVVGGKGEQGDIDARVEQIRKEIDNSSSDYD
REKLQERVAKLAGGVAVIKIGAATEVEMKEKKARVDDALHATRAAVEEGVVPGGGVALVR
ALSSIGDLKGDNEEQNAGIALVIRALEAPLRQIVHNAGGEPSVVVQEVRNGSGNYGYNAA
SGEYGDMLEMGILDPAKVTRSALQAAASIAGLMITTEAMVADKPEENGGAGGAPDMGGMG
GMGGMGGMM
NT seq
1650 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaagaagtattgttccgtgactccgcccgccagcgcatggccaagggcgtgaac
accctggccgacgcggtcaaggtgaccctggggccgaaaggccgcaacgtggtgctggag
aaatccttcggcgcgcccaccatcaccaaggacggcgtgtccgtggccaaggaaatcgaa
ctggaagacaagttcgagaacatgggcgcccagctggtgaaggaagtggcttccaaggcc
aacgacgaagccggtgacggcaccaccaccgccaccgtgctggcccagtccatcgtcaac
gaaggtctgaaggcggtcgccgccggcatgaacccgatggacctcaagcgtggcatcgac
aaagccaccgacgccgtggtcgagcagctcaagtccctgtccaccccgtgtgacaacacc
aagagcatcgagcaggtgggcaccatctccgccaactccgacaagtccgtgggtgaaatc
atcgcccaggccatggagaaggtcggtcaggaaggcgtgatcaccgtcgaggaaggccag
gcgctgatcaacgagctggaagtcgtggaaggcatgcagttcgaccgcggctacctgagc
ccgtacttcatcaacaacaacgagaagatgcaggtggagctcgaggacccctacatcctg
ctcgttgacaagaagatctccaacatccgcgaactgctgccggtgctggagaacgtggcc
aaggccggtcgtccgctgatgatcatcgccgaggacatcgaaggcgaagcgctggccacc
ctggtggtcaacaacatgcgcggcatcatcaagtgcgccgccgtgaaagcgcccggcttc
ggtgaccgccgcaaggccatgctgcaggacatcgccatcctcaccggcggtaccgtgatt
tccgaggaagtgggcctgagcctggagaacgtgtccctggaggacctgggctccgccaag
aaggtcaacatcgacaaggaaaacaccaccgtggtgggcggtaaaggcgagcagggcgac
atcgacgcccgcgtcgagcagatccgcaaggaaatcgacaactcctcctccgactacgac
cgcgagaagctgcaagagcgcgtggccaagctggccggcggcgtggccgtgatcaagatc
ggcgcggccaccgaagtggagatgaaggagaagaaagcccgcgtcgacgacgccctgcac
gccacccgcgcggccgttgaagaaggcgtggtgcccggcggcggcgtcgccctggtgcgc
gccctgtccagcatcggcgacctgaaaggcgacaacgaagagcagaacgccggcatcgcg
ctggtgatccgcgctctcgaagcgccgctgcgtcagatcgtccacaacgccggcggcgag
ccgtccgtggtggtgcaggaagtgcgcaacggttccggcaactacggctacaacgccgcc
agcggcgagtatggtgacatgctggaaatgggtatcctggaccccgccaaggtaacccgc
tccgcgctgcaggcggcggcgtccatcgctggcctgatgatcaccaccgaagccatggtg
gccgacaagccggaagaaaacggcggcgccggtggcgctccggacatgggcggcatgggc
ggtatgggtggcatgggcggcatgatgtaa
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