KEGG   Alcanivorax sp. ALC70: ASALC70_01215
Entry
ASALC70_01215     CDS       T09695                                 
Symbol
rpoN
Name
(GenBank) RNA polymerase sigma-54 factor
  KO
K03092  RNA polymerase sigma-54 factor
Organism
alca  Alcanivorax sp. ALC70
Pathway
alca02020  Two-component system
alca02040  Flagellar assembly
Brite
KEGG Orthology (KO) [BR:alca00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    ASALC70_01215 (rpoN)
 09140 Cellular Processes
  09142 Cell motility
   02040 Flagellar assembly
    ASALC70_01215 (rpoN)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:alca03021]
    ASALC70_01215 (rpoN)
Transcription machinery [BR:alca03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     ASALC70_01215 (rpoN)
Motif
Pfam: Sigma54_DBD Sigma54_CBD Sigma54_AID HTH_IclR DUF1059
Other DBs
NCBI-ProteinID: UWN49021
LinkDB
Position
1156198..1157610
AA seq 470 aa
MTPQLQQAIRLLQLSTLDLRMEIQQAVENNPLLELEDGAEDFSADEPEGDADGDMELERD
DALDDLVEGPVETDSDWDDLYVGQSSAGGAGEGDDADAWQQRHANPVTLLEHLEWQLNLT
PMSDRDRVIAQIILEALDERGYVTVPLDDLLATAEAQIADPDDPVEEDEILAVLHRLQQF
DPVGVASRDLAECLGVQLAQLPADTAHLDTAGAILEHQEFLEKHDYAGLRRALGVGEADL
VEALALLRTLDPAPGQQIGGEDVDYAVPDVVVRAHRGGWRVELNEEVLPKVNLHAQYAHM
ARQVGGEDGQYLRNCMQEAKWFLKSLQSRNDTLLKVASRIVEVQQDFFNYGEEAMKPLVL
ADIAEAVEMHESTISRVTNQKFMLTPRGVFELKYFFSSHVDTDGGGECSSTAIRAIIKKL
VAAENPRKPLSDNKLANLLNDQGIKVARRTVAKYREAMRIPSSSSRKRLV
NT seq 1413 nt   +upstreamnt  +downstreamnt
atgacgccccagctgcaacaggcgatccgcctgctgcagctgtcgacgctggacctgcgc
atggagatccagcaggcggtggaaaacaaccccctgctggagctggaggacggcgccgag
gacttttccgccgacgagccggaaggcgacgccgacggcgacatggagctggagcgcgac
gacgccctggacgatctggtcgagggtccggtggaaaccgacagcgactgggacgacctc
tacgtgggccagagcagcgccggcggcgccggtgaaggcgacgacgccgatgcctggcag
cagcgccacgccaacccggtgaccctgctggaacacctggaatggcagctcaacctgacc
cccatgagcgaccgcgaccgggtgatcgcccagatcattctggaagccctggacgagcgc
ggctacgtcaccgtgcccctggacgacctgctggccaccgccgaggcacagatcgccgac
ccggacgatccggtggaagaagacgagatcctggcggtgctgcaccggctgcagcagttc
gatccggtgggcgtggccagccgcgacctggccgagtgcctgggcgtgcagctcgcccag
ctgcccgccgacaccgcccacctggacaccgccggcgccattctcgagcaccaggagttt
ctggagaaacacgactacgccggcctgcgccgggccctgggcgtgggcgaggcggacctg
gtggaggccctggcgctgctgcgcaccctggacccggccccgggccagcagatcggcggc
gaggacgtggactacgcggtgcccgacgtggtggtgcgcgcccaccgtggcggctggcgg
gtggagctcaacgaggaagtactgcccaaggtcaacctgcacgcccaatacgcccacatg
gcccgccaggtgggcggcgaggacggccagtacctgcgtaactgcatgcaggaggccaaa
tggttcctgaagagcctgcagagccgcaacgacaccctgctcaaggtggccagccgcatc
gtcgaggtgcagcaggacttcttcaactacggcgaggaggccatgaagcccctggtgctg
gccgacatcgccgaggcggtggagatgcacgaatccaccatcagccgggtcaccaaccag
aagttcatgctcacgccacggggggtgttcgagctcaagtacttcttctccagccatgtg
gataccgacggcggcggtgagtgttcctccaccgccattcgtgccatcattaagaagctg
gtcgccgccgagaaccctcgcaagccgctcagcgacaacaagctggcgaacctgctcaac
gaccagggcatcaaggtggcgcgccgcaccgtcgccaagtaccgcgaggcgatgcgaatc
ccgtcctccagttcgcgcaagcggctggtttga

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