Alcanivorax sp. ALC70: ASALC70_01466
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Entry
ASALC70_01466 CDS
T09695
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
alca
Alcanivorax sp. ALC70
Pathway
alca03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
alca00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
ASALC70_01466 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
alca03021
]
ASALC70_01466 (rpoA)
03400 DNA repair and recombination proteins [BR:
alca03400
]
ASALC70_01466 (rpoA)
Enzymes [BR:
alca01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
ASALC70_01466 (rpoA)
Transcription machinery [BR:
alca03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
ASALC70_01466 (rpoA)
DNA repair and recombination proteins [BR:
alca03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
ASALC70_01466 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
HHH_XRCC3_RpoA
Motif
Other DBs
NCBI-ProteinID:
UWN49267
LinkDB
All DBs
Position
complement(1385901..1386908)
Genome browser
AA seq
335 aa
AA seq
DB search
MTAVNEFLTPRSIAVNAISETHAKVVLEPLERGFGHTLGTALRRILLSSMPGCAITEVEI
EGVQHEYSSIEGVQEDVINILLNLKNVALKMEDREEATLELVKKGAGEVTADDIQRDHSV
EIVNPGHLICTITGDTELRMRMKVRKGRGYEAADTRQADEDETRGIGRLQLDASYSPVRR
VAYVVEAARVEQRTDLDKLVIDLETDGTIDPEEAIRRAATILQQQIAVFVDLEQDAKPEP
KQEREEIDPILLRPVDDLELTVRSANCLKAENIYYIGDLVQRTEVELLKTPNLGKKSLTE
IKDVLASKGLSLGMRLENWPPVSLRDDDRLNTKLR
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atgaccgccgtgaacgaatttctcacgccccgctcgatcgcggtcaacgcgatcagcgag
acccacgccaaggtcgtactggagccgctggagcgtggttttggccatactctgggcacg
gcgctgcgccgcatcctgctgtccagcatgcccgggtgcgcgatcaccgaagtggagatc
gagggcgtacagcacgaatactcctccatcgaaggggtgcaggaagatgtgatcaacatc
ctcctcaacctgaagaacgtggccctcaaaatggaggaccgcgaagaggcgaccctggag
ctggtcaagaaaggcgccggtgaagtgaccgccgacgacatccagcgcgatcacagcgtg
gagatcgtcaaccccggccacctgatctgcaccatcaccggtgacaccgagctgcgcatg
cgcatgaaggtgcgcaagggccgcggctacgaagccgccgatacccgccaggccgacgaa
gacgagacccgcggcatcggccgcctgcagctggacgccagctacagcccggtgcgtcgc
gtcgcctacgtggtggaagccgcccgggtggagcagcgcaccgacctggacaagctggtg
atcgatctggaaaccgacggcaccatcgatccggaagaagcgatccgccgcgctgccacc
atcctgcagcaacagatcgccgtgttcgtcgatctcgagcaggatgccaagcccgagccc
aagcaggaacgcgaggaaatcgatccgatcctgctgcgtccggtggacgatctggaactg
accgtccggtccgccaactgcctcaaggcggagaacatctattacatcggtgacctggta
cagcgtaccgaggtggaacttctcaagaccccgaacctgggcaagaagtccctcaccgag
atcaaggacgtgctggcttccaaaggcctgtcgctgggcatgcgcctggaaaactggccg
ccggtcagcctccgggatgatgaccggctcaacaccaagttgcgttaa
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