Alcanivorax sp. ALC70: ASALC70_02158
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Entry
ASALC70_02158 CDS
T09695
Symbol
mutM
Name
(GenBank) Formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
alca
Alcanivorax sp. ALC70
Pathway
alca03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
alca00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
ASALC70_02158 (mutM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
alca03400
]
ASALC70_02158 (mutM)
Enzymes [BR:
alca01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
ASALC70_02158 (mutM)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
ASALC70_02158 (mutM)
DNA repair and recombination proteins [BR:
alca03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
ASALC70_02158 (mutM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
Phage_attach
Motif
Other DBs
NCBI-ProteinID:
UWN49940
LinkDB
All DBs
Position
complement(2016790..2017632)
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AA seq
280 aa
AA seq
DB search
MPELPEVETTRRGIEPHVAGRVLTAVTVREPRLRWPVDARVGELRDRPIRALRRRAKYLL
IDLGDLELGIHLGMSGTLRVVEADTPLRKHDHVDLHLDSGRLLRFNDPRRFGALLYLAEG
LTHPLLANLGPEPLDEAFGGDWLYQRSRGRRVSVKSFIMDNATVVGVGNIYAQESLFLAG
IHPSRPAGRISRARYERLALSIRAVLAKAIEAGGTTLRDFTRADGQPGYFAQQLLVYGRA
GQPCPSVGRRCAVPVMASGARYFARPASAEWPPAAILPGS
NT seq
843 nt
NT seq
+upstream
nt +downstream
nt
atgcccgaactacccgaagtggaaaccacccggcgcggcattgagccccacgtggccggc
cgcgtgctcaccgccgtcaccgtgcgcgagccgcgcctgcgctggccggtggacgcccgc
gtgggcgagctgcgcgaccggcccatccgcgccctgcggcggcgcgccaagtacctgctt
attgacctgggcgacctggagctggggatccatctgggtatgtccggcaccctgcgggtg
gtggaggcggacacgccgctgcgcaagcacgaccacgtggacctgcacctggactccggc
cggctgctgcgcttcaacgatccgcgccgcttcggcgccctgctctatctggcggagggg
ctgacccatccgctgctggccaatctcgggccggagcccctggacgaggcgttcggcggc
gactggctgtaccagcgcagccgggggcggcgggtgtcggtgaagagcttcatcatggac
aacgccaccgtggtcggggtgggcaacatctatgcccaggaaagcctgttcctggccggc
attcatccgtcgcgccccgccgggcgcatcagccgggcccgttacgagcgcctggccctg
tcgatccgcgccgtgctggccaaggccatcgaggccggcggcaccaccctgcgggatttc
acccgcgccgacggtcagcccggctacttcgcccagcagttgctggtctacggccgcgcc
ggccagccctgccccagtgtggggcgccgctgcgcagtgcccgtcatggccagcggagca
cggtattttgcgcggcctgccagcgctgagtggccgccagcggccatattgccgggctca
taa
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