Alcanivorax sp. ALC70: ASALC70_02454
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Entry
ASALC70_02454 CDS
T09695
Symbol
uvrD
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
alca
Alcanivorax sp. ALC70
Pathway
alca03420
Nucleotide excision repair
alca03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
alca00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
ASALC70_02454 (uvrD)
03430 Mismatch repair
ASALC70_02454 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
alca03400
]
ASALC70_02454 (uvrD)
Enzymes [BR:
alca01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
ASALC70_02454 (uvrD)
DNA repair and recombination proteins [BR:
alca03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
ASALC70_02454 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
ASALC70_02454 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
Viral_helicase1
AAA_30
AAA_12
Motif
Other DBs
NCBI-ProteinID:
UWN50233
LinkDB
All DBs
Position
2292090..2294195
Genome browser
AA seq
701 aa
AA seq
DB search
MTAEDPHLLVLAGAGSGKTRVLVHRIAWQIATGQASPFGVLAVTFTNKAAAEMRGRIEQL
LDMPAGGMWVGTFHSIAHRLLRTHWQEAGLPQNFEILDAEDQQRLVRRVIRELGLDEQRW
PHRQATWFINGQKDEGLRAAHMDIGEGDLFLKTMQSIYQAYEDACARGGLVDFNEMLLRV
LELFRDNDDLRGHYQRRFRHLLVDEFQDTNAIQYAWLRLLASADNAVTIVGDDDQSIYGW
RGAKIENIHKFSRDFPDTRTIRLEQNYRSTGTILQAANAVISHNSDRLGKELWTDGGHGE
PIRVYAGFNEVDEARFIAGKVESLAQEGMARREMAVLYRSNAQSRVLEEAFLQAGIPYRI
YGGQRFFERAEIKNALSYLRLLSNRRADSAFERVVNTPTRGIGAKTLEALRQIARERSLP
LWDAAAVMINERLLSARAGNALLAFLRLVDRLAEETANLDLAETAEHVIAASGLIEFHGQ
EKGEKGQQRQENLRELVSATRQFGDEDGEDDPLAAFLDHAALESGEGQADAHEDAVQMMT
LHSAKGLEFPVVFITGVEEGLFPHQMSAEDPGRLAEERRLCYVGLTRAMRELYLTHAESR
RLYGSETFNPPSRFLREIPGELVEEVRARAGVSRPMGGGGGTLRQEGANGIVLGARVLHP
KFGEGTVLHFEGQGPNARLQINFDGAGTKWLVSQYARLEVI
NT seq
2106 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgccgaggacccgcacctgctggtgctggccggcgccggctccggcaagacgcgg
gtcctcgtgcaccgcatcgcctggcaaatcgccaccggccaggcgtcgccgttcggcgtg
ctggcggtgaccttcaccaacaaggccgccgcggaaatgcgcggccgcatcgagcagctg
ctggacatgcccgccggcggcatgtgggtgggcactttccacagcatcgcccaccgcctg
ttgcgcacccactggcaggaagccgggctgccccagaacttcgagatcctcgacgccgag
gaccagcagcgtctggtgcgccgggtgatccgcgagctcggactcgacgagcagcgctgg
ccccaccgtcaggccacctggttcatcaatggccagaaggacgagggtctgcgcgccgct
cacatggatatcggcgaaggcgaccttttccttaagaccatgcagagcatctaccaggcc
tacgaggacgcctgtgcccggggcggcctggtggatttcaacgagatgctgctgcgcgtg
ctggagctgttccgcgacaacgacgatctgcgtggccattaccagcgccgcttccgccat
ctgctggtggacgagttccaggacaccaacgccatccagtacgcctggctgcggctgctg
gccagcgccgacaacgcggtcaccattgtcggcgacgacgaccagtccatctacggctgg
cgcggcgccaagatcgagaacatccacaagttcagccgcgacttcccggacacccgcacc
atccgcctggagcagaactaccgctccacgggcaccatcctgcaggccgccaacgcggtg
atcagccacaacagcgaccgcctcggcaaggagctgtggaccgacggcggccacggcgag
ccgattcgcgtgtacgccggcttcaacgaggtggacgaggcgcgtttcatcgccggcaag
gtggaaagcctggcccaggaaggcatggcgcgccgggaaatggcggtgctgtaccgctcc
aacgcccagtcccgggtgctggaggaggcgttcctgcaggccggcattccctaccggatt
tatggcgggcagcgcttcttcgagcgcgccgagatcaagaacgccctgtcctacctgcgc
ctgttgagcaaccggcgggcggattccgccttcgagcgggtggtcaacaccccgacccgg
ggcatcggcgccaagaccctggaggcgctgcgccagatcgcccgggagcgttccctgccg
ctgtgggacgcggcggcggtgatgatcaacgagcgcctgctcagtgcccgcgccggcaac
gccctgctggccttcctgcggctggtggaccggctcgccgaggaaaccgccaacctggac
ctggcggaaaccgccgagcacgtgatcgccgccagtggcctgatcgagttccacggccag
gagaaaggcgagaaaggccagcagcgccaggagaacctgcgcgagctggtctccgccacc
cgccagttcggtgacgaggatggcgaggacgaccccctggccgccttcctggaccacgcc
gccctggaatccggcgagggccaggctgacgcccacgaggacgcggtgcagatgatgacc
ctgcactccgccaaggggctggaattcccggtggtgttcatcaccggcgtggaagagggg
ctgtttccccatcagatgtccgccgaggatccgggccggctcgccgaggagcggcgcctg
tgctacgtgggcctgacccgcgccatgcgcgagctgtacctgacccacgccgagagccgc
cggctttacggcagcgagaccttcaacccgcccagccgcttcctgcgcgagatccccggc
gagctggtggaggaagtgcgcgcccgcgccggcgtcagccggcccatgggcggcggtggt
ggaacgctgcgccaggagggcgccaatggtattgtgctgggggcgcgggtgctgcacccg
aaattcggcgagggcacggtactgcatttcgagggccagggccccaacgcccgcctgcaa
atcaacttcgatggcgccggcaccaaatggctggtcagccagtacgcgcgcctggaagtg
atctga
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