Alcanivorax sp. ALC70: ASALC70_03112
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Entry
ASALC70_03112 CDS
T09695
Symbol
polC
Name
(GenBank) DNA polymerase III PolC-type
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
alca
Alcanivorax sp. ALC70
Pathway
alca03030
DNA replication
alca03430
Mismatch repair
alca03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
alca00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
ASALC70_03112 (polC)
03430 Mismatch repair
ASALC70_03112 (polC)
03440 Homologous recombination
ASALC70_03112 (polC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
alca03032
]
ASALC70_03112 (polC)
03400 DNA repair and recombination proteins [BR:
alca03400
]
ASALC70_03112 (polC)
Enzymes [BR:
alca01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
ASALC70_03112 (polC)
DNA replication proteins [BR:
alca03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
ASALC70_03112 (polC)
DNA repair and recombination proteins [BR:
alca03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
ASALC70_03112 (polC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Motif
Other DBs
NCBI-ProteinID:
UWN50889
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All DBs
Position
2890702..2891295
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AA seq
197 aa
AA seq
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MLKRLVQKRRHGNGPHGHLFETPDGSELMALDCETTGLDPRRAELVSVAAVPIRAGRVCA
GAALDLHLAPPSSLDGESICIHRLRGVDLAQGLDVEDALEQLLAFIGNRPLVGWCLDFDL
AVINRYLRARLGFDLPNPVVELSDLYRKRERYRSPEALPDLRFERVAGKLGVPVIGRHTA
RGDATTAALMYLKLKRS
NT seq
594 nt
NT seq
+upstream
nt +downstream
nt
atgctgaaacggctggtacagaaacggcgccacggcaacggcccccatggccatttgttc
gagacgccggatggcagcgaactgatggcgctggattgcgaaaccaccgggttggatccg
cgccgcgcggaactggtgtcggtggcggcggtgccgatccgtgccggccgggtgtgcgcc
ggcgccgccctggaccttcatctggcgccgccatccagcctggatggcgagtcgatttgc
attcaccgtttgcgcggcgtggatctggcccagggcctggacgtggaagacgctctggag
caattgctggccttcattggcaaccggcccctggtgggctggtgcctggatttcgatctg
gcggtgatcaaccgctacctgcgcgcgcggctcgggttcgatctgcccaacccggtggtc
gagttgtccgacctgtatcgcaagcgcgagcgctaccgcagcccggaggcactgccggac
ctgcgtttcgagcgggtggccggcaaactgggggtgccggtgatcggccgtcacaccgcc
cggggcgacgccaccacggcggcgctcatgtacctgaaactgaagcgttcctga
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