Alcanivorax sp. ALC70: ASALC70_03796
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Entry
ASALC70_03796 CDS
T09695
Symbol
recJ
Name
(GenBank) Single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
alca
Alcanivorax sp. ALC70
Pathway
alca03410
Base excision repair
alca03430
Mismatch repair
alca03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
alca00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
ASALC70_03796 (recJ)
03430 Mismatch repair
ASALC70_03796 (recJ)
03440 Homologous recombination
ASALC70_03796 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
alca03400
]
ASALC70_03796 (recJ)
DNA repair and recombination proteins [BR:
alca03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
ASALC70_03796 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
ASALC70_03796 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
ASALC70_03796 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
DHHA1
RecJ_OB
Glyco_transf_4
Glyco_trans_1_4
Motif
Other DBs
NCBI-ProteinID:
UWN51569
LinkDB
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Position
3519098..3520798
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AA seq
566 aa
AA seq
DB search
MTASSYPRIRRRPSVSVDWPDVPPLLARILANRGLTSAEQLELTLGRLPHPDGFRGLAAA
VELLLAAREQHWRICIVGDYDADGATATALMVRGLEALGFPRPDYLVPNRFEYGYGLSPA
IVDLARETVAPDLIITVDNGIASVDGVAAARAAGMRVLITDHHLPGDRLPDADAIANPRL
EEQGFPAPNLAGVGVAFYLLMAVQRGLGVRRGVVDLLDLVALGTVADVVALDDANRILVE
QGLRRLRAGKGNPGLRALLQVAGRDPARALAADLGFAAGPRLNAAGRLADMRHGIECLLA
DSVSEARQYAEELDAINRERRGIEQGMRDAAMAEVERLRDRTLPPALCLHGRDWHEGVVG
ILASRVKEAVHRPVIAFAPAREEGLVKGSGRSIPGLHLRDVLDAVATRHPELLHKFGGHA
MAAGMTLRADDLDAFRDAFQAAVAEAASEELFDQVVDSDGGLGDGDITLATAEMLSHRFP
WGQGFPPPRFDGEFEVLNHRVVGERHLKLTLGLPGVNGVVDGIHFNADPALLGARLSRIE
GVYRLEVNEFRGRRSPQMMFEHLRPV
NT seq
1701 nt
NT seq
+upstream
nt +downstream
nt
atgaccgcaagttcctacccccgtattcgccgccgtccctcggtgtccgtggattggccc
gacgtaccgccgctgctggcgcgcatcctcgccaaccgggggctgacctccgccgagcag
ctggagctgaccctggggcggctgccccatccggatggcttccggggcctggcggcggcg
gtggagctgctgctggccgcccgggagcagcactggcgcatctgcatcgtgggtgactac
gacgccgacggcgccaccgccaccgcgctgatggtgcgcggcctggaggccctgggcttc
ccccgcccggattatctggtgcccaaccgcttcgagtacggctacggcctgtccccggcg
atcgtcgatctggcccgggagaccgtggcgccggatctgatcatcaccgtggacaacggc
atcgccagcgtggacggggtggcggcggcccgggcggcgggcatgcgcgtgctgatcacc
gaccatcacctgcccggcgaccgcctgccggacgccgacgccatcgccaacccgcgcctg
gaggagcagggcttcccggcgcccaacctggccggggtgggcgtggccttctatctgctg
atggcggtgcagcgcggcctgggcgtgcgccggggcgtggtggatctgctcgatctggtg
gccctgggcacggtggcggacgtggtggccctggacgacgccaaccgcattctggtggag
cagggcctgcgccggctgcgcgccggcaagggcaacccggggctgcgcgccttacttcag
gtggccggacgcgacccggcccgggccttggccgcggacctgggcttcgccgccgggccc
cggctcaacgccgccggccggctggcggacatgcgccacggcatcgagtgcctgctggcg
gacagcgtgtccgaggcgcgccagtacgccgaggagctggacgccatcaaccgggaacgg
cgcggcatcgagcagggcatgcgcgatgccgccatggccgaggtggagcgcctgcgcgac
cggaccctgccgccggccttgtgcctgcacggccgtgactggcacgagggcgtggtgggc
attctcgcttcgcgggtgaaggaggcggtgcaccggccggtgatcgccttcgcgccggcc
cgggaagaagggctggtgaagggctccggtcgctcgattcccggcctgcacctgcgcgac
gtgctggacgcggtggccacccgccatccggagttgctgcacaagttcggcggccacgcc
atggccgccggcatgaccctgcgcgccgacgacctggacgccttccgcgacgcctttcag
gcggcggtggcggaggccgccagcgaggagctgttcgatcaggtggtggacagcgacggc
ggcctgggcgacggggacatcaccctggccaccgccgagatgctgtcgcaccgcttcccc
tggggccaggggttcccgccgccgcgcttcgacggcgagttcgaggtgctcaaccatcgg
gtggtgggcgagcgccatttgaagctcaccctggggctgccgggcgtcaacggcgtggtg
gacggcattcacttcaacgccgacccggcgctgctgggcgcgcgcctgagtcgcatcgag
ggggtctaccggctggaggtgaacgagttccgcgggcggcgctcgccgcagatgatgttc
gagcatttgcggcccgtgtaa
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