KEGG   Alcanivorax sp. ALC70: ASALC70_03822
Entry
ASALC70_03822     CDS       T09695                                 
Symbol
rnc
Name
(GenBank) Ribonuclease 3
  KO
K03685  ribonuclease III [EC:3.1.26.3]
Organism
alca  Alcanivorax sp. ALC70
Pathway
alca03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:alca00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    ASALC70_03822 (rnc)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:alca03019]
    ASALC70_03822 (rnc)
   03009 Ribosome biogenesis [BR:alca03009]
    ASALC70_03822 (rnc)
   03036 Chromosome and associated proteins [BR:alca03036]
    ASALC70_03822 (rnc)
Enzymes [BR:alca01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.26  Endoribonucleases producing 5'-phosphomonoesters
    3.1.26.3  ribonuclease III
     ASALC70_03822 (rnc)
Messenger RNA biogenesis [BR:alca03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     ASALC70_03822 (rnc)
Ribosome biogenesis [BR:alca03009]
 Eukaryotic type
  90S particles
   RNase
    ASALC70_03822 (rnc)
 Prokaryotic type
  rRNA processing factors
   ASALC70_03822 (rnc)
Chromosome and associated proteins [BR:alca03036]
 Eukaryotic type
  Gene silencing
   microRNA pathway
    Microprocessor complex
     ASALC70_03822 (rnc)
SSDB
Motif
Pfam: Ribonucleas_3_3 Ribonuclease_3 dsrm RM44_endonuclase DND1_DSRM Phage_P2_GpU DSRM_2
Other DBs
NCBI-ProteinID: UWN51595
LinkDB
Position
3542648..3543331
AA seq 227 aa
MDDLDRLGRRLGYRFQDPSLFELALSHRSVSRRRNNERLEFLGDAQLSQIISTELFHRFP
DAAEGQLTRMRAFLVRGQTLAEVARELGVGEYLILGGGELKSGGHRRDSILADALEALIG
AIVIDGGEDTCRRVILEWFAERLERISPQSVRKDAKTRLQEWLQARKHELPVYDVLSVTG
QAPRQTFEVECTLPDLNQRFVATGASRRRSEQQAAEQALSWLEQSHE
NT seq 684 nt   +upstreamnt  +downstreamnt
atggacgatctggatcgcctcggccgccggctcggttaccggttccaggacccgtcgctg
tttgaactggccctcagccatcgcagcgtgagccggcggcgcaacaatgaacggctggaa
ttcctgggcgacgcccagctcagtcagattatttccacggagctgttccaccgctttccg
gacgccgccgagggccagctcacgcgcatgcgcgccttcctggtgcgcggccagaccctg
gccgaggtggcccgggagctgggcgtgggggaatacctgatcctcggcggcggcgagctg
aaaagcggcggccaccgccgtgactcgatcctcgccgatgccctggaagccctgatcggc
gccatcgtcatcgacggcggcgaggacacctgccggcgggtaatcctggaatggttcgcc
gagcgcctggagcgcatttcgccgcagtcggtgcgcaaggacgccaaaacccgcttgcag
gaatggctgcaggcgcgcaagcatgagttacccgtctacgacgtgctgtcggtgaccggc
caggcgccgcgccagaccttcgaggtggaatgcacgctgccggatctgaatcaacgtttc
gtggccaccggcgccagccgccgccgctccgagcagcaggcggcggagcaggccctgagc
tggctggagcagtcccatgagtga

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