Alcanivorax sp. ALC70: ASALC70_03822
Help
Entry
ASALC70_03822 CDS
T09695
Symbol
rnc
Name
(GenBank) Ribonuclease 3
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
alca
Alcanivorax sp. ALC70
Pathway
alca03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
alca00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
ASALC70_03822 (rnc)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
alca03019
]
ASALC70_03822 (rnc)
03009 Ribosome biogenesis [BR:
alca03009
]
ASALC70_03822 (rnc)
03036 Chromosome and associated proteins [BR:
alca03036
]
ASALC70_03822 (rnc)
Enzymes [BR:
alca01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
ASALC70_03822 (rnc)
Messenger RNA biogenesis [BR:
alca03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
ASALC70_03822 (rnc)
Ribosome biogenesis [BR:
alca03009
]
Eukaryotic type
90S particles
RNase
ASALC70_03822 (rnc)
Prokaryotic type
rRNA processing factors
ASALC70_03822 (rnc)
Chromosome and associated proteins [BR:
alca03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
ASALC70_03822 (rnc)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
RM44_endonuclase
DND1_DSRM
Phage_P2_GpU
DSRM_2
Motif
Other DBs
NCBI-ProteinID:
UWN51595
LinkDB
All DBs
Position
3542648..3543331
Genome browser
AA seq
227 aa
AA seq
DB search
MDDLDRLGRRLGYRFQDPSLFELALSHRSVSRRRNNERLEFLGDAQLSQIISTELFHRFP
DAAEGQLTRMRAFLVRGQTLAEVARELGVGEYLILGGGELKSGGHRRDSILADALEALIG
AIVIDGGEDTCRRVILEWFAERLERISPQSVRKDAKTRLQEWLQARKHELPVYDVLSVTG
QAPRQTFEVECTLPDLNQRFVATGASRRRSEQQAAEQALSWLEQSHE
NT seq
684 nt
NT seq
+upstream
nt +downstream
nt
atggacgatctggatcgcctcggccgccggctcggttaccggttccaggacccgtcgctg
tttgaactggccctcagccatcgcagcgtgagccggcggcgcaacaatgaacggctggaa
ttcctgggcgacgcccagctcagtcagattatttccacggagctgttccaccgctttccg
gacgccgccgagggccagctcacgcgcatgcgcgccttcctggtgcgcggccagaccctg
gccgaggtggcccgggagctgggcgtgggggaatacctgatcctcggcggcggcgagctg
aaaagcggcggccaccgccgtgactcgatcctcgccgatgccctggaagccctgatcggc
gccatcgtcatcgacggcggcgaggacacctgccggcgggtaatcctggaatggttcgcc
gagcgcctggagcgcatttcgccgcagtcggtgcgcaaggacgccaaaacccgcttgcag
gaatggctgcaggcgcgcaagcatgagttacccgtctacgacgtgctgtcggtgaccggc
caggcgccgcgccagaccttcgaggtggaatgcacgctgccggatctgaatcaacgtttc
gtggccaccggcgccagccgccgccgctccgagcagcaggcggcggagcaggccctgagc
tggctggagcagtcccatgagtga
DBGET
integrated database retrieval system