Alcanivorax sp. ALC70: ASALC70_04157
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Entry
ASALC70_04157 CDS
T09695
Symbol
ihfB
Name
(GenBank) Integration host factor subunit beta
KO
K05788
integration host factor subunit beta
Organism
alca
Alcanivorax sp. ALC70
Brite
KEGG Orthology (KO) [BR:
alca00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
alca03032
]
ASALC70_04157 (ihfB)
03036 Chromosome and associated proteins [BR:
alca03036
]
ASALC70_04157 (ihfB)
03400 DNA repair and recombination proteins [BR:
alca03400
]
ASALC70_04157 (ihfB)
DNA replication proteins [BR:
alca03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
ASALC70_04157 (ihfB)
Chromosome and associated proteins [BR:
alca03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
ASALC70_04157 (ihfB)
DNA repair and recombination proteins [BR:
alca03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
ASALC70_04157 (ihfB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-DNA_bdg
HU-CCDC81_bac_2
Motif
Other DBs
NCBI-ProteinID:
UWN51922
LinkDB
All DBs
Position
3889338..3889703
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AA seq
121 aa
AA seq
DB search
MASALTKSKLIARIAKQNEQQLSPRDVELAVKHLIEVMADTLSEGGRIEVRGFGSFSLHF
RAPRVGRNPKTGASVKLHGKYVPHFKSGKELRERVNESMPDHPSGSDQDDRDHPRGEAAD
G
NT seq
366 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcagcgttaaccaagtcgaaactgattgcccgtattgccaaacaaaatgaacag
cagttgtctcccagggacgtggagcttgccgtcaaacatcttatcgaggtcatggccgac
accctctccgagggcgggcgcatcgaggtgcgtggcttcggcagtttttcccttcatttc
cgtgccccgcgcgtgggccgcaatcccaagaccggcgccagtgtgaagctgcacggaaag
tacgttccgcacttcaagtccggcaaggaattgcgcgaacgggtcaatgaatccatgcca
gaccatccctccggtagcgaccaggacgaccgggatcatccccgtggcgaggcggccgac
ggctga
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