Alcanivorax sp. ALC70: ASALC70_04250
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Entry
ASALC70_04250 CDS
T09695
Name
(GenBank) hypothetical protein
KO
K03578
ATP-dependent RNA helicase HrpA [EC:
5.6.2.6
]
Organism
alca
Alcanivorax sp. ALC70
Brite
KEGG Orthology (KO) [BR:
alca00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
alca03019
]
ASALC70_04250
Enzymes [BR:
alca01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
ASALC70_04250
Messenger RNA biogenesis [BR:
alca03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
ASALC70_04250
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF3418
OB_NTP_bind
Helicase_C
DEAD
HA2_C
AAA_22
AAA_19
HA2_N
ABC_tran
NACHT
nSTAND3
SLFN-g3_helicase
AAA_25
T2SSE
AAA_16
AAA_23
ResIII
TIMELESS_C
Methyltransf_11
TsaE
PhoH
Motif
Other DBs
NCBI-ProteinID:
UWN52014
LinkDB
All DBs
Position
3974968..3978564
Genome browser
AA seq
1198 aa
AA seq
DB search
MTETSLQDLYQRLAQARAGDRPRLKKRLDGLSRRFSEHGRDKVAAAIDTSVAARERRRGL
LAAPLQWPDLPVVRHREELAAAIRDHQVVVVAGETGSGKTTQLPKICLELGRGVDGYIGH
TQPRRLAARSVAARLAEELHTRVGEKVGYKVRFSEQVGEDSLIKLMTDGMLLSEIQNDRF
LNQYDTLIIDEAHERSLNIDFLLGYLKQLLPRRPDLKVIITSATIDHERFAEHFDGAPVF
EVSGRTYPVDIRYRPPEGDRDLGPQVEDVLREIQRDERRDGPPAARDVLVFLSGEREIRD
VHHHLKRCDFRDTELLPLYARLSGAEQQRVFSAHRGRRVVLSTNVAETSLTVPGIRYVID
AGTARISRYSVHSKVQRLPVEPVAQASANQRAGRSGRLMPGICFRLYDEDDFLQRPEFTD
PEIQRTNLAAVILQMSDLRLGAVEDFPFMEPPDGRLIRDGYRLLEELGALDGKRKPTPLG
RQLARFPLDPTLARMVVAGADKKALREVLVIVAALAVQDPRERPRDKQQQADQAHQPFED
KDSDFLWFLNLWHWAEEQREALSRNQFEKALKKTFLAPSRMREWRDTHRQLLLQARDQGW
TLNAEPAEYEAIHRALLTGLLGNVMQRGEEGEWLSTRNRKPLIWPGSTLSKRAGKKNGAR
WLMAAEQVETSRLFARCVARIESQWVEQEAAHLIKRQYFEPHWSKKRGCVMAKEQVNLFG
LILASGRRVNYGPLDPPLARELMIREGLVDGQLTREPPFVKANRERLERLEDMEHKLRRR
DILVDEEARVAFYDQRLPDGLYTLTHLETWYRKEASDGQRQALLMDDDFLLSRSPDLRDD
AFPDLLDLDGLTLPLEYSFDPTGDTDGVTLVVPVAALDQVPEERLDWLVPGLLREKLEAL
IRGLPKARRRHFVPVPDYVNALMEALAPDRPLLPAMTRELQRMTGVRVEQEEWPVERIPD
YLRMNLRVVDGDGATLREGRDPAALRRAFADQVQAAAEAPAHREPDPEGRDWCFGVLPES
EEVEQGGVRLRYYPGLEDRGETVARRRWSDAEEAAWHHGYGCARLALLALGDQVRALKRF
AGQQPGFQKLKADKTELGRHGLERVLLRLAADHFRFHAEPVRAEADWRARFDGGRGDFVA
ATEKALAEYGRMFATYRGVMGRLEKNFPLAWAHAHRDLKTQLADLFGGDFPWRWRRTG
NT seq
3597 nt
NT seq
+upstream
nt +downstream
nt
atgaccgaaacttcattacaggatctttaccaacggttggcccaggcccgcgccggggac
cggccgcgcctgaaaaaacgcctggacggcctgagccggcgtttcagcgagcacggccgt
gacaaggtggccgccgccatcgacacctccgtggccgcccgggagcgccgccgtgggttg
ctggcggcgccgctgcagtggccggacctgccggtggtgcgccaccgcgaggagctggcg
gcggcgatccgcgatcaccaggtggtggtggtggccggcgaaaccggctccggcaagacc
acccagttgcccaagatctgcctggagctgggacgtggcgtggacggctacatcggccac
acccagccgcgccggctggcggcgcgctcggtggcggcgcggctggccgaggagctgcac
acccgggtcggcgagaaggtcggctacaaggtgcgcttcagcgagcaggtgggcgaggac
agcctgatcaagctgatgaccgacggcatgttgctcagcgagatccagaacgaccgcttc
ctcaatcagtacgacaccctgatcatcgacgaggcccacgaacgcagcctcaacatcgat
ttcctgctcggctacctcaagcagctgttgccgcgccgtccggacctgaaggtgatcatc
acctcggcgaccatcgaccacgaacgtttcgccgagcacttcgacggcgccccggtgttc
gaagtatccgggcgcacctatccggtggacatccgctaccggccgccggaaggcgaccgg
gacctgggcccccaggtggaggacgtgctgcgcgaaatccagcgcgacgagcgccgcgac
ggtccgccggcggcccgggatgtgctggtgttcctgagcggtgagcgggaaatccgcgac
gtgcaccatcacctcaaacgctgcgatttccgcgatacggaactgctgccgctttacgcg
cgcttgagcggcgctgaacagcagcgggtgttctcggcgcaccgggggcggcgggtggtg
ctgagcaccaatgtggcggaaacctccctcacggtgcccggcatccgctacgtgatcgac
gccggcaccgcccgcatcagccgttacagcgtgcactccaaggtgcagcggctgccggtg
gaaccggtggcccaggccagcgccaatcagcgcgccggccgcagtggccggctgatgcca
ggcatctgcttccgtctctacgacgaggacgactttctgcagcggccggaattcaccgat
ccggaaatccagcgcaccaatctggcggcggtgatcctgcaaatgtcggacctgcgcctg
ggggcggtggaggacttcccgttcatggagccgccggatggccggctgatccgtgacggt
taccggctgctggaggagctgggcgccctggacggcaaacgcaagcccacgcccctgggc
cggcaactggcgcgtttccccctggacccgaccctggcgcgcatggtggtggccggcgcc
gacaagaaggcgctgcgcgaggtgctggtgatcgtcgccgccctggcggtgcaggatccc
cgcgagcgcccccgggataagcagcagcaggcggaccaggcccaccagccgttcgaggac
aaggacagcgatttcctgtggttcctgaatctgtggcactgggcggaggaacagcgggag
gcgctgtcgcgcaaccagttcgaaaaggccctgaagaaaaccttcctggcgccatcgcgc
atgcgcgaatggcgtgacacccaccgccagttgctgctgcaggccagggaccagggctgg
accctgaacgcggagccggcggagtacgaagccattcaccgggccctgctcaccggcctg
ctgggcaacgtgatgcagcgcggcgaggagggcgaatggctttccacccgcaaccgcaag
ccgctgatctggccgggctccaccctgagcaaacgggccggcaagaagaacggcgcccgc
tggctgatggccgccgagcaggtggaaaccagccggctgttcgcccgctgcgtggcgcgc
attgaatcgcaatgggtggagcaggaagcggcgcacctgatcaagcgccagtacttcgag
ccgcactggtcgaagaaacggggctgcgtgatggccaaggagcaggtcaacctgttcggg
ctgatcctggcgtccggccgccgcgtgaactatggcccgctggatccgcccctggcccgg
gagctgatgatccgcgagggcctggtggacggccagctgacccgggagccgccgttcgtg
aaggccaaccgggaacgcctggaacggctcgaggacatggagcacaagctgcgccgacgg
gacatcctggtggacgaggaagcccgcgtggcgttctacgaccagcggttgccggacggg
ctgtacacgctcacccacctggagacctggtaccgcaaggaggccagcgatgggcaacgc
caggcgctgctcatggacgacgacttcctgctgtcgcgcagcccggacctgcgcgacgac
gccttccccgacctgctcgatctggacggcctgaccctgcctcttgagtacagcttcgac
cccaccggtgacaccgacggcgtgaccctggtggtgccggtggcggccctggatcaggtg
cccgaggagcggctcgactggctggtgccgggcctgctgcgtgaaaagctggaggcgctg
attcgcggcctgcccaaggcgcgccgccggcatttcgtgccggtgccggactacgtcaat
gccttgatggaagccctggccccggaccggccgctgctgccggccatgacccgggagctg
cagcgcatgaccggggtgcgggtggagcaggaggaatggccggtggagcggattcccgac
tacctgcgcatgaatctgcgggtggtggacggcgacggtgccaccctgcgcgagggccgc
gaccctgcggcgctgcgccgggccttcgccgaccaggtgcaggccgccgccgaggccccg
gcccaccgggagccggacccggaggggcgtgactggtgcttcggcgtcttgccggagagc
gaggaggtggagcagggcggcgtgcgcctgcgctactacccgggcctggaagaccggggc
gagacggtggcgcggcggcgctggtccgacgccgaggaggcggcctggcaccacggttac
gggtgcgcgcggctggcgctgctggccctgggcgaccaggtgcgtgccctgaagcggttc
gccggccagcagccgggcttccagaagctcaaggcggacaaaacggagctgggccggcac
ggcctggagcgggtgctgctgcgcctggccgccgatcactttcgctttcacgccgagccg
gtgcgcgccgaggcggactggcgcgcgcgcttcgacggcgggcgcggcgacttcgtggcc
gccaccgagaaagcgctggccgagtacggccgcatgttcgccacttaccggggcgtgatg
gggcgcctggagaagaattttccgctcgcctgggcccacgcccaccgggatctcaagacc
cagctcgccgacctgttcggcggcgatttcccctggcggtggaggcggactggctga
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