Alcanivorax sp. ALC70: ASALC70_04320
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Entry
ASALC70_04320 CDS
T09695
Symbol
truA
Name
(GenBank) tRNA pseudouridine synthase A
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
alca
Alcanivorax sp. ALC70
Brite
KEGG Orthology (KO) [BR:
alca00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
alca03016
]
ASALC70_04320 (truA)
Enzymes [BR:
alca01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
ASALC70_04320 (truA)
Transfer RNA biogenesis [BR:
alca03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
ASALC70_04320 (truA)
Prokaryotic type
ASALC70_04320 (truA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-ProteinID:
UWN52082
LinkDB
All DBs
Position
4038662..4039471
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AA seq
269 aa
AA seq
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MTRIALAVEYDGSAFHGWQTQQPGVRTVQEEVEKGLSRVADHPVTLICAGRTDAGVHATG
QVCHFDSDADRDMKAWVMGGNRFIPDDVAIRWAVPVDDDFHARFSAHRRCYRYVIYNHPR
PPALFRRQVTWNHRPLDVDAMARASQHLVGTHDFTSYRSVHCQAKSPVKTLTRFQIHRRG
PLIVLEVEANAFLMHMVRNMAGVLMSIGAGHRDPDWARQVLEARDRTQGGVTAPPYGLYL
VEIGYPEAFPLPDHPRGPLWLADLDGGHN
NT seq
810 nt
NT seq
+upstream
nt +downstream
nt
atgacgcgaatcgccctggcggtggaatacgacggcagcgcctttcatggctggcagacc
cagcagcccggcgtgcgcaccgttcaggaagaggtggagaagggcctgtcccgggtggcc
gaccatccggtgaccctgatctgcgccgggcgcaccgacgccggcgtgcacgccaccggt
caggtgtgtcatttcgattccgacgcggaccgtgacatgaaagcctgggtgatgggcggc
aaccgcttcatccccgacgacgtggccatccgctgggcggtgccggtggacgacgatttc
cacgcccgcttcagcgcccaccggcgctgctatcgctacgtgatctacaatcacccccgg
ccaccggccctgttccgtcgccaggtgacctggaaccaccgccccctggacgtggacgcc
atggcccgggccagccagcatctggtcggcacccacgatttcacctcctaccgcagcgtg
cattgccaggcgaagtcgccggtgaaaaccctgacccggttccagattcaccgtcgcggg
ccgctgatcgtgctggaggtggaagccaacgcctttttgatgcacatggtgcgcaacatg
gccggcgtgctgatgagcattggcgccggccaccgcgacccggactgggcccgccaggtg
ctggaagcccgcgaccgcacccaggggggcgtcacggcgccgccctacggcctctacctg
gtggaaatcggttacccggaggccttcccgctgcccgaccatccgcgtggcccgctgtgg
ctcgcggacctggacggcggccataattga
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