Alcaligenes sp. NLF5-7: MID00_01330
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Entry
MID00_01330 CDS
T10407
Symbol
rng
Name
(GenBank) ribonuclease G
KO
K08301
ribonuclease G [EC:3.1.26.-]
Organism
alcn Alcaligenes sp. NLF5-7
Brite
KEGG Orthology (KO) [BR:
alcn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
alcn03019
]
MID00_01330 (rng)
03009 Ribosome biogenesis [BR:
alcn03009
]
MID00_01330 (rng)
Messenger RNA biogenesis [BR:
alcn03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
MID00_01330 (rng)
Ribosome biogenesis [BR:
alcn03009
]
Prokaryotic type
rRNA processing factors
MID00_01330 (rng)
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Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_E_G
RNase_E_G_Thio
S1
E3_UFM1_ligase
Motif
Other DBs
NCBI-ProteinID:
UTM02091
LinkDB
All DBs
Position
269823..271286
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AA seq
487 aa
AA seq
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MHEDILINVTPFETRVALVEQGAVQEIHIERSIQRGYVGNVYLGKVARVLPGMQSAFIDI
GLERAAFIHVADLRQNRTERNQGSPTTPIEKLLYEGQSLLVQVIKDPLGTKGARVSTQIS
IAGRMLVYLPFDPHIGVSQRIGSDADRIELRERVSRLMPKDEKGGFIVRTQAECATDEEI
SADQQYLRTLWTRIQERIREQGAPSVLYTDLSLAQRVLRDMVTPNTQSIIVDSRTVVQEM
KEWAQIYTPSVLERISHHKGSRALFDTAHVDEEINRALSRRVDLKSGGYLIIDQTEALTT
VDVNTGGFVGGRNFDDTIFKTNLEAAIALARQLRLRNLGGIIILDFIDMDDPAHRESVLQ
ELQKALAKDRTRVTINGFSQLGLVEMTRKRTRDSLAHQLCEPCPTCQSRGSVRTARTVCY
EILREVLREAKQFNPKEFRILAAQEVVDLFLEEESQHLAVAGDFIGKPISLEVDPHYSQE
QYDIILL
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atgcatgaagacatcctgattaacgtcactccgtttgaaacccgtgttgccctggtcgag
caaggtgctgtccaggaaattcatatcgagcgcagcatccaacgcggttatgtggggaac
gtctatctgggaaaagtggcgcgggttttgcccggcatgcaaagtgcctttattgatatt
ggcctggaacgcgcggcgtttatccatgtcgcggacttacgccagaatcgcaccgagcgt
aatcagggtagtcccaccacgccgattgaaaagctcttgtacgaaggtcagtctctatta
gtacaagtcatcaaggatccattgggtaccaagggtgctcgtgtatcaacacaaatcagt
attgcgggccgcatgttggtgtatctgccttttgatcctcatattggcgtatcgcaacgg
attggttcggatgcagacaggatcgagctgcgcgagcgtgtcagtcgtcttatgcccaag
gatgagaaaggcggtttcatcgtacggactcaggccgaatgcgcgacggatgaagagatc
agtgcagaccagcagtatctgcgtactttgtggacacgtattcaggaacgtatccgcgag
caaggcgccccctctgtgctttatacggacttgagcctggcgcaacgtgttttacgcgat
atggtgacgcccaacacccaatccatcatcgtggactcacgcaccgtggtgcaggagatg
aaggaatgggcacaaatttacacgccctcggtgctggagcgcatcagtcatcacaaaggc
agtcgcgctctgtttgatacagcccatgtggatgaagaaatcaatcgcgccctgtcgcgt
cgggtggatttgaagtccggcggctatttgattatcgatcagaccgaagcactcactacg
gtggatgtgaataccggcggtttcgtcggtggtcgcaactttgacgacacgatcttcaaa
acaaacctggaagcagcgattgccctggcccgccaactgcgtctgcgcaatctgggtggc
atcatcatcctggactttattgatatggacgacccggctcaccgggagtctgtcttgcaa
gagctgcaaaaagcgctggccaaagaccgcacccgtgtgacgatcaatggtttcagtcag
ttaggtctggtggaaatgacgcgcaaacgtacgcgtgactctttagcacaccaactatgc
gagccctgccccacttgccagtcgcgcggctcggtacgcacggcccgcaccgtctgctat
gaaatcttgcgcgaggtcctgcgcgaagccaaacaattcaatcccaaggaatttcgtatt
ttggcggctcaggaagtcgtggatctgtttctggaagaagaaagccagcacctggccgtg
gcgggcgactttattggcaagcccatttccctggaggtagatccacactactcccaggaa
cagtacgacattattttgctgtaa
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