Alcaligenes sp. NLF5-7: MID00_01810
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Entry
MID00_01810 CDS
T10407
Name
(GenBank) RNA-binding transcriptional accessory protein
KO
K06959
protein Tex
Organism
alcn Alcaligenes sp. NLF5-7
Brite
KEGG Orthology (KO) [BR:
alcn00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99973 Transcription
MID00_01810
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GFIT
Motif
Pfam:
Tex_central_region
Tex_YqgF
HHH_3
Tex_N
HHH_9
S1
YqgF
HHH_7
S1_RRP5
T2SSK
HHH_6
Spt6_S1
DUF460
ZapG-like
RNase_II_C_S1
Motif
Other DBs
NCBI-ProteinID:
UTM02179
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Position
372294..374642
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AA seq
782 aa
AA seq
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MTVETLAQQQDHQQILALLASELNIRIQQAASTVELLDNGATVPFIARYRKEATGGLDDN
VLRDLEVRLIYLRDMQSRRHAILESIRQQEKLTPELEQAILAADTKQRLEDLYAPYKPKR
RTRAQIAREAGLEPLADAILAQKDADPVALAEGYLNAEAKIDTAKAALDGARDILAERFA
EQADLLEAMRDYLWKSAHLYSKVAEGKEQEGDKFRDWFDFNEALRQLPSHRVLALLRGRQ
QGALDLRLGLNPEQDALLPHPCVLKVAELTDIGADFSADASPRDHWLAEVCRWTWRVKLL
TAFESELIGRLREEAEQESTRVFAANLRDLLLAAPAGNKAVLGLDPGIRTGVKAAVIDAT
GKVLDTATVYPFEPRRDREGAIRTLAGLATRYQVELVAIGNGTASRETEKLVADLQSAFP
QLPLTRVVVSEAGASVYSASELAAQEFPDMDVSLRGAVSIARRLQDPLAELVKIDPKSIG
VGQYQHDVNQRELARSLDAVVEDCVNAVGVDVNTASAPLLARVSGLNNTLAKNIVTWRDE
NGAFQSRKQLREVPRFGEKAFEQAAGFLRIPGAANPLDASAVHPEAYPVAARILERLQTE
ASDVMGKSGALKGLSPSDFTDERFGLPTVRDIFNEIEKPGRDPRPEFTTAKFQEGINSLN
DLTPGMILEGVVTNVANFGAFVDVGVHQDGLVHISALSETFVKDPRDVVRVGQTVKVKVQ
EVDVARKRIGLTMRLNDDSGPVRGSSNTSNAPQRRSGNNRPNRQAEPAPTGAMAAAFSKL
RR
NT seq
2349 nt
NT seq
+upstream
nt +downstream
nt
atgactgtggaaaccctcgcccagcaacaggatcaccaacagattctggcgctactggcc
tctgaactgaacatccgcatccaacaagccgcctctacggttgagctcttggacaacggg
gccacggtcccttttattgcccgttaccgcaaggaagctaccggcggcctggacgataat
gtcctgcgtgatctggaagtgcgcctgatctatttgcgcgatatgcaatcgcgtcgtcat
gccattctggaatcgatccgccagcaagaaaaactgacgcccgagctggagcaagccatt
ttggcggctgacaccaagcagcgtctggaagacttatacgccccttacaagcccaagcgc
cgtacccgtgcccagatcgcccgcgaagccggcctggagccgctggcggacgccattctg
gcccagaaggacgcagaccctgtggcgctggccgaaggctatctgaatgccgaagccaag
atcgacacggccaaagccgccctggacggtgcccgcgacattctggccgaacgctttgcc
gagcaggccgatctgctggaagccatgcgcgactatctgtggaagtccgctcacctgtac
tccaaggttgccgaaggcaaggaacaggaaggcgacaagttccgcgactggttcgacttt
aacgaagcgctgcgccaactaccttctcaccgtgtactggctttgttgcgcggtcgtcag
caaggtgcactggacctgcgcctgggcctgaaccccgagcaggatgcgcttctgccccac
ccttgtgtactgaaagtcgccgagctgaccgatattggcgctgacttttccgccgacgcc
agcccacgcgaccattggctggccgaggtttgccgctggacctggcgcgtcaagttgctg
acagcattcgaatccgaactgattggccgtctgcgcgaagaagccgagcaagaatccacc
cgcgtgtttgccgccaatctgcgcgatttgctgctggcagcccccgctggcaataaagcc
gttctgggcctggacccaggtattcgtaccggcgtaaaagccgctgtgatcgatgcaacc
ggcaaggtgctggataccgccaccgtctacccctttgaaccccgtcgtgaccgcgaaggc
gccattcgtaccctggccggcctggcgactcgctaccaagttgaactggtggcgattggt
aacggcacagcgtcacgcgaaaccgagaaactggttgccgacctgcaatccgctttcccg
cagttgcctttgacccgcgtggtcgtgtccgaggcgggcgcttcggtgtactccgcctct
gaactggccgcacaagaattcccggatatggacgtcagcctgcgcggtgccgtctctatt
gcccgccgcctgcaagacccactggccgagctggtcaagatcgaccccaaatccattggt
gtgggtcagtaccagcacgacgtgaaccagcgcgaactggctcgcagcctggacgccgta
gttgaggattgtgtgaacgccgtgggtgtggacgtcaacaccgcctctgctcccctgctg
gcgcgcgtttccggcctgaacaacacgctggccaaaaacatcgtcacctggcgtgacgaa
aacggtgccttccaaagccgcaagcagttgcgtgaagtgccgcgctttggtgaaaaagcc
tttgaacaggcagcgggctttttgcgtattcccggtgcagccaaccctctggatgcctcg
gcagttcaccccgaagcctacccggttgccgcccgcattctggagcgcctgcaaaccgaa
gccagcgatgtcatgggtaaatccggcgcattgaaaggcttgtcgccttcggacttcacg
gatgaacgctttggtttgcccaccgtgcgtgatatttttaatgaaattgaaaagcccggt
cgcgaccctcgccctgaattcaccaccgccaagttccaggaaggcatcaactccctgaac
gatttgacgcccggcatgattctggaaggcgtggtcaccaatgtggccaactttggtgcc
tttgtggacgtgggtgtgcaccaggacggtctggtgcatatctcggccctgtccgagacc
tttgtcaaagatccgcgtgatgtggttcgcgttgggcagaccgttaaggttaaagtccag
gaagtggatgtagctcgtaagcgtatcggcttgaccatgcgcctgaacgacgacagcggc
cctgtgcgtggttccagcaacaccagcaacgcaccccagcgccgttccggaaacaatcgc
cccaaccggcaagctgaaccggcaccgacaggtgctatggcagccgcctttagcaaactt
cggagataa
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