Alcaligenes sp. NLF5-7: MID00_02035
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Entry
MID00_02035 CDS
T10407
Name
(GenBank) dipeptide ABC transporter ATP-binding protein
KO
K02031
peptide/nickel transport system ATP-binding protein
K02032
peptide/nickel transport system ATP-binding protein
Organism
alcn Alcaligenes sp. NLF5-7
Pathway
alcn02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
alcn00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
MID00_02035
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
alcn02000
]
MID00_02035
Transporters [BR:
alcn02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
MID00_02035
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
SMC_N
AAA_22
AAA_16
Mg_chelatase
AAA_5
AAA_7
NACHT
oligo_HPY
AAA_25
RsgA_GTPase
AAA
AAA_29
RNA_helicase
nSTAND3
nSTAND1
TsaE
PRK
tRNA_lig_kinase
ATP-synt_ab
Sigma54_activat
AAA_33
Rad17
CbiA
APS_kinase
NPHP3_N
AAA_18
AAA_19
DUF5906
AAA_15
NB-ARC
Septin
G-alpha
Motif
Other DBs
NCBI-ProteinID:
UTM02220
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Position
complement(426875..428560)
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AA seq
561 aa
AA seq
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MSELEDVSAVKPAATPAVLSIEGLELRVQSDAGVQSVVRNLSLAVQRGETFALVGESGCG
KSMTAMALLRLLPEAAWMQSGQIALDGLELPPLPEQQMQDVRGKRISVIFQEPSTSLNPV
MSIGRQISEVIRRHGVAPAGQERARAIKWLERVGIPGAAQRYDDFPFQFSGGQKQRIMIA
IALAAEPDLLVADEPTTALDVTVQAQILQLLADIQKEMGLAILLITHDLLLVKQYADYVA
LMRHGQIVEAGLASQFFLRPSHPYARELLNAIPTFEKRGRPLSRAPAPIEAVPPRNSGKE
LVLDIQGLSVSYKQAGSWWRRLPVIPVVKDLSLQLHKGETLALVGESGCGKSTVARTLMR
LLDHQAQISGQVQMQGQNVLQVKGKALRQLRSSLQIIFQDPYGSLDPRMMVGDILLEGLT
ALRPELDAKARRKRIETLVDQVGLPKNALDRYAHEFSGGQRQRIAIARALAVEPAVLICD
EPTSALDVSVQAQILDLMRELQMELGLAYLFITHNFGVVEYLADRIAIMAKGRIVEQGSA
QHVLFHPQEELTQRLLAAVPR
NT seq
1686 nt
NT seq
+upstream
nt +downstream
nt
atgagcgagcttgaagatgtctccgccgtgaagcccgctgcaacgcctgccgtgctgagt
atcgagggtctggaactgcgtgtgcagtccgatgccggtgtgcaaagtgtggtgcgtaat
ctgtctttggccgtgcagcgcggtgaaacctttgccttggtgggggagtccggctgcggc
aaaagcatgacggccatggcgctcctgcgcctcttgcccgaagccgcctggatgcaatct
ggtcaaattgccttggacgggttggaactgccacctttgcctgaacagcaaatgcaggat
gtgcgcggtaaacgcatcagcgtgatttttcaggagccgtctaccagtctgaatccggtc
atgtccattggccggcagatcagcgaggtgattcgtcgtcatggtgtggctcctgcgggg
caggaaagggcaagggccatcaaatggctggagcgagtcggcatccccggtgccgcacag
cgttacgatgactttccattccagttctccggcggccagaagcaacgcatcatgattgcc
attgccttggcggcggaacctgatttgctggtggctgacgaaccaactaccgcgctggat
gtaacggttcaggcgcagattctgcagttgttggccgatatacagaaagagatgggcctg
gctatcttgctgattacgcacgatttgctgctggtcaaacagtatgccgactatgtggcc
ttgatgcggcacggacaaatagtggaagccgggctggcaagccagttctttttacgccct
agccatccttatgctcgtgaattgctcaatgccattcccacttttgagaaacgtgggcgt
cccttgtcccgtgcccctgcgcccattgaagcagtcccaccgcgcaatagcggcaaagag
ctggtgctggatattcagggcttgtctgtttcctataagcaggctggttcctggtggcga
cgcctgcctgtcattcccgtggtcaaagacttgagcctgcaactgcacaagggcgaaacc
ctggctttggtcggcgagtcgggctgcggtaaaagcacggtcgcacgtacgttgatgcgc
ttgctggatcatcaggctcagatcagcgggcaggtgcagatgcaggggcagaacgtcttg
caagtgaaaggcaaggccttgcggcaattgcgctcaagcttgcagatcatttttcaggac
ccgtatgggtcgctggacccacgcatgatggtgggcgatatcctcctggaaggtctgacg
gcgctgcgtcccgagttggatgccaaggcgcgtcgcaaacgaattgaaactttagtggac
caagtcggtctacccaagaatgccctggatcgttacgcacatgagttttccggcgggcaa
cgtcagcgcatcgctattgcccgtgccttggcggtagagcccgccgttctgatttgcgat
gaacccacctcggccctggacgtgtccgtacaagcgcaaattctggatttgatgcgtgag
ttacaaatggaactgggtctggcttatttattcattacccataatttcggggttgtggag
tatctggccgatcgaattgctatcatggccaagggacgcatcgtggagcagggcagcgca
cagcacgttctgttccatccgcaggaagagttgacgcagcgtctgctggccgctgttccc
cgttaa
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