Alcaligenes sp. NLF5-7: MID00_02320
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Entry
MID00_02320 CDS
T10407
Name
(GenBank) LysR substrate-binding domain-containing protein
KO
K13928
LysR family transcriptional regulator, malonate utilization transcriptional regulator
Organism
alcn Alcaligenes sp. NLF5-7
Brite
KEGG Orthology (KO) [BR:
alcn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
alcn03000
]
MID00_02320
Transcription factors [BR:
alcn03000
]
Prokaryotic type
Helix-turn-helix
LysR family
MID00_02320
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
HTH_23
HTH_IclR
HTH_30
Sigma70_r4_2
HTH_29
HTH_8
Cro
Motif
Other DBs
NCBI-ProteinID:
UTM02273
LinkDB
All DBs
Position
complement(482389..483324)
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AA seq
311 aa
AA seq
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MFLIDEKITVRRLEVLLAFLEAGTIARAAEQLGTSAVSVHRALKSLEEGLRCPLFLQEGR
NLVPQESARELAEAAKETIRTLQHGIDAAREAGGYSSDQLRIGSMYSLTIRLVPRLLVEL
KVHKPLLQIDLVLDSNEKLLQKLRGGHIDAALIELPQEQPDDLEVLPIFDDELMFAAPMD
WQGSDSSVVDLERCSKERFVSLTDDFATGRDMQRMLAKAGFDADIVMRTGDIFSLMSLVS
GGVGCSLLPARAKAVFSDKIQWLSLEQKYRHSQRIGLVCMKSRERSPNVLSLLRACRIVR
TQLEKEGPTSG
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
atgtttctgatcgacgaaaaaatcacggtacgacgcttggaagttctgctggcttttctg
gaagctggcacgattgcccgtgccgctgaacaattgggcaccagtgcggtgagcgtgcat
cgggccttgaaaagcctggaggaagggttgcgctgcccgctgttcttgcaggagggccgc
aatctggtgccacaggagtcggcgcgcgagctggccgaagcggccaaggaaaccatacgc
accttgcagcacggcattgatgctgcccgggaagccggggggtattcgtcggatcagttg
cgcataggttccatgtactcgctgacgatacgtttggtgccgcgccttttggtagagctg
aaggttcacaagcctttattgcagattgatctggtgctggactccaacgagaagctgttg
caaaagttgcggggcggtcatattgacgcagccttgatcgagttgccacaggagcaaccg
gatgatctggaagtgctgcccatttttgatgatgagctgatgtttgctgctcccatggat
tggcaaggatcggactcgtccgtggtggatctggagcgttgttccaaggaacgttttgtg
tcgctgaccgatgattttgcaacggggcgggacatgcagcgcatgttggccaaagccggg
tttgatgccgatattgtgatgcgcaccggagacatcttttccttgatgagtctggtcagt
ggtggtgtgggatgctcccttttacctgcgcgagccaaagcggttttttctgacaagatt
cagtggctgagcctggagcagaagtatcgacattcacagcgtatcggcctggtgtgcatg
aagtcgcgcgagcgcagcccgaatgtgttgagcttgttacgggcctgccggatcgtgcgt
actcagttggaaaaagaagggccgacgtcgggctga
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