Alcaligenes sp. NLF5-7: MID00_03410
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Entry
MID00_03410 CDS
T10407
Name
(GenBank) AMP-binding protein
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
alcn Alcaligenes sp. NLF5-7
Pathway
alcn00061
Fatty acid biosynthesis
alcn00071
Fatty acid degradation
alcn01100
Metabolic pathways
alcn01212
Fatty acid metabolism
alcn02024
Quorum sensing
alcn04146
Peroxisome
Module
alcn_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
alcn00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
MID00_03410
00071 Fatty acid degradation
MID00_03410
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
MID00_03410
09145 Cellular community - prokaryotes
02024 Quorum sensing
MID00_03410
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
alcn01004
]
MID00_03410
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
alcn04147
]
MID00_03410
Enzymes [BR:
alcn01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
MID00_03410
Lipid biosynthesis proteins [BR:
alcn01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
MID00_03410
Exosome [BR:
alcn04147
]
Exosomal proteins
Exosomal proteins of breast milk
MID00_03410
Exosomal proteins of breast cancer cells
MID00_03410
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-ProteinID:
UTM02474
LinkDB
All DBs
Position
complement(716419..718116)
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AA seq
565 aa
AA seq
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MDTQQKPWLEHYPASVPHEIQLGAEQTLIDCLDAAMKKHKDRTALTFMGHDISYEHLDRS
ADAFAAWLQAQGLERGSRVMLMLPNGLPFLICLLGTMRAGMVGVNTNPQYTERELEFQLA
DSQAQVIVILETFAHVLQQVPDNVKPAHVVLSTVGDLMGLKGSVVNFAVRYLKRMVPSYS
LPGSHSLKAVLEQGSKLSLSRQPAKPDDLALLQYTGGTTGRPKGAMLSQRNLMANVLQVE
AVGFPALGDFKGPAYTMMVALPLYHIFALTVCGLFAMYAGMHMVLVMNPRDLNSVYKAWK
RNPPEVVPAVNTLFNALANHEKFRTLPFAQLKLCLAGGAALQKAVAERWLAVTGCPLIEG
YGLSETSPVVAVNSTDSRDYSGTIGFPLPSTDVLLLDEQGQPVAMGEQGELAVKGPQVMS
AYWNQPEETANVFTPNGFLKTGDIGVMDQQGRIRLVDRKKDMILVSGFNVYPNEIEDVVA
AHPDVLEVAAVGVPSEHSGESIKLFVVKRNPSLTEADIKQWCKERLTAYKRPRIIEFRDE
LPKSNVGKILRRVLRDEQVKPEAQA
NT seq
1698 nt
NT seq
+upstream
nt +downstream
nt
ttggatactcagcaaaaaccttggctcgagcattatccggcctccgtgccccatgagatt
cagttaggcgccgagcagaccttgatcgattgtctggatgccgccatgaaaaagcataag
gacaggactgcgctgacctttatggggcatgacatttcctatgaacatctggaccgcagc
gcggatgccttcgcggcttggttacaggcacagggtctggagcgtggcagccgtgtgatg
ttgatgctgcccaatggtttgcccttcctgatttgcttgctgggcaccatgcgggcgggc
atggtgggcgtcaataccaacccgcaatacaccgaacgcgaactggagttccaactggcc
gatagccaggctcaggtcattgtgattctggaaacctttgcgcatgtgctgcagcaagtt
cctgacaatgtgaagcctgcccacgtggtgttgagtaccgtgggtgatctgatggggctc
aagggcagcgtggtgaatttcgccgtgcgttatttgaaacgcatggtgccgtcttattct
ttgccgggttcgcacagtctgaaggccgtgctggagcagggcagcaaattgagcctgagc
cgtcagcccgccaaaccggatgatttggcgctgttgcaatacacgggcggtacaacgggc
cgccctaaaggcgccatgttgagccagcgcaatttgatggcaaacgtcttgcaggtggag
gccgtgggctttcccgctttgggcgactttaaaggtccggcttacaccatgatggtggcc
ttgccgctgtatcacatctttgcgctgacggtttgcggtctgtttgccatgtatgcaggt
atgcatatggtgctggtgatgaatccgcgcgatctcaattcggtttacaaggcctggaaa
cgcaatccgcctgaagtcgttccagcggtgaataccttgttcaatgcgctggcgaatcac
gaaaaattccgtaccttgccgtttgcgcagctcaaactgtgtctggccggtggtgccgcc
ttgcaaaaagccgtggccgagcgctggctggctgtgacgggctgccctttgattgaaggt
tatggtctgtcggaaacctccccggtggtggcggtgaactcgacggattcacgcgattac
agtggcacgattggatttcccttgccttcaaccgatgtgctcttgctggacgaacagggg
caaccggttgccatgggcgaacaaggcgagctggccgtcaaagggccgcaggttatgtcg
gcttactggaaccagccggaggaaaccgccaatgtctttacgcctaatggtttcttgaag
acgggtgatatcggtgtcatggatcagcagggacgtattcgtctagtggatcgcaagaaa
gacatgattctggtgtcgggcttcaacgtctatccgaatgaaattgaagacgtggtggcg
gcgcatcctgatgtgctggaagtggcggcggtgggggtgcccagcgagcacagtggtgaa
agcatcaagctgttcgtggtcaaacgtaatccgtccttgactgaagccgatatcaagcaa
tggtgcaaagagcgtctgacggcgtacaagcgtccccgcattattgagttccgtgatgaa
ctgcccaagagcaatgtgggcaagatcttgcgccgcgtcctgcgggatgagcaagtcaag
cctgaggcgcaggcttga
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