Alcaligenes sp. NLF5-7: MID00_03550
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Entry
MID00_03550 CDS
T10407
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
alcn Alcaligenes sp. NLF5-7
Pathway
alcn03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
alcn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MID00_03550 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
alcn03019
]
MID00_03550 (recQ)
03400 DNA repair and recombination proteins [BR:
alcn03400
]
MID00_03550 (recQ)
Enzymes [BR:
alcn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
MID00_03550 (recQ)
Messenger RNA biogenesis [BR:
alcn03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
MID00_03550 (recQ)
DNA repair and recombination proteins [BR:
alcn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
MID00_03550 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
HRDC
Helicase_C
RecQ_Zn_bind
ResIII
Motif
Other DBs
NCBI-ProteinID:
UTM02500
LinkDB
All DBs
Position
complement(751597..753423)
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AA seq
608 aa
AA seq
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MAQSALEVLQEVFGYDSFRGSQHEIIETLIQGGDALVLMPTGGGKSLCYQIPALVRPGTG
VVVSPLIALMQDQVDALNELGVNAAYLNSTQDWQTAREVEREFLTGQLDLLYVAPERLLT
DRCLDLLARGQISLFAIDEAHCVSQWGHDFRPEYLGLDLLAQRWPGVPRVALTATATQLT
RVEIAQRLKLEDARHFVASFDRPNICYRIIEKNEVRKQLLSFIQEEHSGDAGIVYCLSRS
RVEDTAEFLCKNGIHALPYHAGLDAQQRAINQARFLREEGVVMVATIAFGMGVNKPDVRF
VAHIDLPKSVEGYYQETGRAGRDGEVATAWLAYGLQDVVQLHRMINQSQGDAAHRRQQGQ
ALDAMLGLCETISCRRQRLLAYFDQQIEPCGNCDTCLEAPEAWDGTVAAQKMLSTIYRLW
RERGQRFGAGHLIDILLGKLTDRVKEHEHDKLTVFGVGKDLTDQAWRGVLRQLLAHSLVT
VDPEGYGTLLLTEASREVLKGERTLMLRRETVTRGPAAHRVKGQAPAGPALEPDQQRRFE
ALRAWRAATAREHGVPAYVIFHDATLREVAIRCPSSEADLEPITGIGVRKREAYGEALLR
CVQELQTQ
NT seq
1827 nt
NT seq
+upstream
nt +downstream
nt
atggcccagtcagcacttgaggttcttcaggaagtttttggttatgacagttttcgtggt
tctcagcacgagattatcgagaccctgatccaaggcggcgacgccctggtcttgatgccc
accggcggcggcaagtcgctctgttaccagattcctgctttggtgagacccggcaccggc
gtggtagtgtctcccctgattgccttgatgcaggatcaggtggacgccctcaacgagttg
ggcgttaacgcggcgtatctgaattccacccaggattggcaaactgcccgcgaggtcgag
cgcgaatttctgacggggcagttggatctgctctatgtggctcccgaacgtttgctgaca
gaccgctgcctggatttgctggcacgcggccagatttccctgtttgccattgacgaagcc
cactgcgtatcgcaatggggtcacgattttcgccctgaatatctgggtctggatttgctg
gcccagcgttggccaggtgtgccacgggttgccttgaccgctaccgccactcagttgacg
cgggtagaaattgcccagcgcctgaagctggaggatgcccggcattttgttgccagtttt
gatcgtcccaatatttgctaccgcatcattgaaaagaacgaggtgcgcaagcagctcttg
agtttcattcaggaagagcactccggagatgcggggattgtgtattgtctgtcgcgctcg
cgcgtggaagacacggccgagttcctgtgcaagaacggtattcatgccttgccctatcat
gcaggactggacgcgcagcagcgcgccatcaaccaggctcgcttccttcgagaagaaggg
gtggtcatggtggcgaccattgcttttggcatgggcgtcaataaaccggatgtgcgtttt
gtagcccacattgacctgcccaaatcggtagaagggtattaccaggaaaccgggcgggca
gggcgcgatggcgaagtggccacggcctggctggcctatggcctgcaggacgtggtgcaa
ttgcaccgcatgattaaccagtcgcaaggcgatgcggcacaccgacgccagcagggacag
gcgctggatgccatgttgggcctttgcgaaaccatttcctgccgtcgccagcgcttgctg
gcgtattttgaccagcaaatagaaccttgcggtaactgcgacacctgtctggaagcgcca
gaagcctgggatggcacagtggcggcgcagaaaatgctctccaccatctatagattatgg
cgtgagcgcggtcagcgcttcggggccgggcacctgatcgacatcctgctgggcaagctg
acggatcgtgtcaaagagcacgagcacgacaagctgaccgtctttggtgtgggcaaggat
ttgaccgatcaagcctggcgcggagtgctgcgccagttgctggcgcatagcttggtcacg
gtggacccggagggctacggcaccttgttgctgaccgaggccagccgcgaagtgctgaaa
ggggagcgcaccctgatgttgcggcgcgaaaccgtaacacgcggaccggctgcacaccga
gtaaaaggtcaggcgcctgccggacctgctcttgaacccgatcaacaaagacgattcgag
gctttgcgcgcctggcgtgcggccaccgcacgcgaacatggtgtgccagcctatgtcatt
ttccatgatgctactttgcgcgaagtggccattcgctgccctagttcagaggctgatctg
gagccgattacaggcataggcgtacgcaaaagagaggcctatggcgaggctttgctgcgc
tgcgttcaagagctccagacgcaatag
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