KEGG   Alcaligenes sp. NLF5-7: MID00_05125
Entry
MID00_05125       CDS       T10407                                 
Symbol
traD
Name
(GenBank) type IV conjugative transfer system coupling protein TraD
  KO
K12071  conjugal transfer pilus assembly protein TraD
Organism
alcn  Alcaligenes sp. NLF5-7
Brite
KEGG Orthology (KO) [BR:alcn00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:alcn02044]
    MID00_05125 (traD)
Secretion system [BR:alcn02044]
 Type IV secretion system
  Conjugal transfer pilus assembly protein
   MID00_05125 (traD)
SSDB
Motif
Pfam: TraG-D_C TrwB_AAD_bind DUF87 Cpta_toxin
Other DBs
NCBI-ProteinID: UTM02799
LinkDB
Position
1081897..1084053
AA seq 718 aa
MAQPHAVEVLLRPAVELHTVAVCTGAAILCLVAPWSLALNPLLGLGSALAFLIFGAIRLR
DAWAILRYRRNIRRLPRYVMTSRDVPVSQQRLFVGRGFRWEQRHTHRLMQTYRPGFRRYV
EPTAIYRAARRLEERLEFAPFPVSTLARALAWDSPLNPARPLPPVGGLPRLHGIEPHEVD
VTLPLGERVGHSLVLGTTRVGKTRLAELFITQDIRRKVRGEHEVVIVFDPKGDADLLKRM
YVEAKRAGREGEFYVFHLGWPDISARYNAVGRFGRISEVATRIAGQLSGEGNSAAFREFA
WRFVNIIARALVELGQRPDYLLIQRHVINIDALFIEYAQHYFAKNEPKAWEVIVQLEAKL
NDKNIPRNMIGREKRVVALEQYLSQVRVYDPVLDGLRSAVRYDRTYFDKIVASLLPLLEK
LTTGKIAQLLAPNYSDLSDPRPIFDWMQVIRKRAVVYVGLDALSDAEVAAAVGNSMFSDL
VSVAGHIYKFGVDDGLPGAAAGAKIPINVHADEFNELMGDEFIPMVNKGGGAGVQVTAYT
QTLSDIEARIGNRAKAGQVVGNFNNLFMLRVRETATAELLTRQLPKVEVYATALMSGATD
SSDPHGNTAFTSNTQDRISTTSVPLIEPAHVVALPKGQCFALIEGGNLWKVRMPLPAPDP
DEAMPKDLQELAGYMRQHYVEAGDWWENQGIPGLQDKALPDDLLDDFRQMAAAEEAEA
NT seq 2157 nt   +upstreamnt  +downstreamnt
atggcccaaccgcatgcggtcgaggttctgctgcggccagcggtggagcttcataccgtg
gcggtctgcaccggcgccgcgattctgtgcctggtggcaccgtggtcgctcgcgctgaac
ccgctgctcggcctgggctcggcactggccttcctgatcttcggcgcgattcgcctgcgc
gatgcctgggcgatcctgcgctatcgccgcaacatccgccgcctgccgcgctacgtgatg
accagccgcgacgtgccggtgagccaacagcggctgttcgtcggccgaggctttcgctgg
gagcagcggcacacgcaccggctgatgcagacctaccggccggggttccgccgctatgtc
gagccgacggcgatctaccgggccgcccggcggctggaggagcggcttgagttcgcgccg
tttcccgtctcgacactggcgcgcgcgctggcctgggacagcccgctcaacccggcgcgg
ccgctgccgccggtcggcgggctgccgcgcctgcacggcatcgagccgcatgaggtcgac
gtcacgctgccgctgggcgagcgcgtcggccactccctggtgctgggcaccacgcgcgtg
ggcaagacgcggctggccgagctgttcatcacccaggacatccgccgcaaggtccgcggc
gagcacgaggtggtgatcgtcttcgaccccaagggcgatgcggacctgttgaagcgcatg
tacgtcgaggccaagcgcgccgggcgcgaaggcgagttctacgtgttccatctgggctgg
ccggacatctcggcgcgctacaacgccgtgggccggttcggacggatctccgaggtggcc
acgcgcatcgccgggcagctctccggcgaaggcaacagcgccgcgttccgcgaattcgcc
tggcgcttcgtcaacatcatcgcgcgcgccctggtggaactgggacagcggccggactac
ctgctgatccagcgccacgtcatcaacatcgacgcgctgttcatcgagtacgcccagcac
tacttcgccaagaacgagccgaaggcctgggaggtcatcgtccagctcgaagccaagctg
aacgacaagaacatcccgcgcaacatgatcgggcgcgagaagcgcgtggtggccctcgaa
cagtacctgtcccaagtgcgcgtctatgaccccgtgctcgacggtctgcgcagcgccgtg
cgctacgaccggacgtacttcgacaagatcgtcgcttcgctgctgccgctgctggagaag
ctcaccaccggcaagatcgcgcaactgctcgcaccgaactattccgacctgtccgacccg
cgaccgatcttcgactggatgcaggtcatccgcaaacgcgcggtggtctacgtggggctg
gatgcgctgtccgacgccgaagtcgcggcggcggtgggcaactcgatgttcagcgatctg
gtctcggtcgccggccacatctacaagttcggcgtcgacgacgggctgcccggcgccgcg
gcgggcgccaagattccgatcaacgtccacgccgacgaattcaatgaactcatgggcgac
gagttcatcccgatggtcaacaagggcggcggtgccggcgtgcaggtgacggcctacacg
cagaccttgagcgacatcgaggcgcgcatcggcaatcgtgccaaggccggtcaggtggtc
ggcaacttcaacaacctgttcatgctgcgcgtgcgcgagaccgccaccgccgagctgctg
acgcgacaactgcccaaggtcgaggtgtacgccacggcactgatgagcggcgccaccgac
agctccgacccgcacggcaataccgcgttcacgtccaacacgcaggaccgcatcagcacg
accagcgtgccgttgatcgagcccgcgcatgtggtggcgctaccgaaggggcagtgcttc
gcgctgatcgagggcggcaacctctggaaagtccgcatgccgctgccggcacccgacccc
gacgaagccatgccgaaggatctgcaggagctggccggctacatgcggcagcactacgtc
gaggcaggagactggtgggagaaccaaggcatccccggcctgcaggacaaggcgctgccc
gacgacctgctggacgacttcaggcagatggccgccgctgaagaggccgaagcatga

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