Alcaligenes sp. NLF5-7: MID00_06490
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Entry
MID00_06490 CDS
T10407
Name
(GenBank) DEAD/DEAH box helicase
KO
K17675
ATP-dependent RNA helicase SUPV3L1/SUV3 [EC:
5.6.2.6
]
Organism
alcn Alcaligenes sp. NLF5-7
Brite
KEGG Orthology (KO) [BR:
alcn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
alcn03029
]
MID00_06490
Enzymes [BR:
alcn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
MID00_06490
Mitochondrial biogenesis [BR:
alcn03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
MID00_06490
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEXQc_Suv3
Helicase_C
SUV3_C
DEAD
Suv3_C_1
Motif
Other DBs
NCBI-ProteinID:
UTM03058
LinkDB
All DBs
Position
complement(1376398..1379598)
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AA seq
1066 aa
AA seq
DB search
MAARRASSVSDSPVPTQAGLLLHPQWLDYPRLEGVARQVAKKARFQDRAGIRRVWLKAWR
LPQDAAFFNQIIAAELGLKDADQRLQSQGVPEVVIRTLRLLYQMSVDKLEADIYEALREQ
LLEQRAQLAGAIASQSLPLSENWPEAERGPRLQALVQAWQSMPLAQTYLWQLQAEQRDRE
QRSQRWEQAQKEREQARQKEQNDKQRKFNQAQERLTAWLKEQGCEPQRITLEAFEGLQAG
EPAHWFMTVYGRNASAAVLTQEFKLDAEQQEFLLQAQAQRQERQREQRQQRWAWEQECIG
SEETMALLGITRQEYELWLADRRLPSTKLEVRGGAAGGRDRVAHHPDLLAAIDQSQIEQW
REQYASSLSNRERAQYQRAADRARTQWRQQQVLNQIKKQEACDYEIDPEDPLRLWWHKDL
WLAVNVPVAGERQHWRANVRMQAAVPLPRTGSELDRLPARVSVLFNTAAQNRLSQRLEDS
LDAFLQTQRPLIDGSSFLELAKALRMALEEGIEQKEIEAGDFEKRLLNGPVRRILESVEQ
QRAQDLMRLGDFPEMFSLARGIRRHLVFRLGPTNSGKTHEALEALMEARSGVYLAPLRLL
AMEVRDRLMNAGIPCNLVTGEERVMVPGAQHTACTVEMMDPTMEVRVAVLDEIQMLQDEQ
RGWAWTAALVGVPARTLFVCGDASVLRPCERLVRSMEETMELEFTERKTPLEVMPYPVEP
PRATGKQGRHKAPWRGRKDRQREAQGVSKGDAVVAFTRKDVLTLSARYRAQGWKVATIYG
ALAPEVRRTESERFSQGEADVLVATDAIGMGLNLPIRRVLFSTVHKFDGRSMRALNATEV
RQIAGRAGRYGLYPKGYVGAMDKQDLNHIRTQLQSDAPSVDLRLPIAPSPEHVQALASLL
DNNNIGAVLQYFAQKVASDSPLFQTAGLKDAIELGFCVDRLAPKLDLREKFTFACAPVSV
DKDTELDYFKRCLSAYVAQRPMALPPAPSWLKSASPSRLEDAELLSKQISLYAWFSMKFP
QVFDQGPWLPEVRSLVSRFIERSLLHQSGFGQTSREAFGTPSPSRR
NT seq
3201 nt
NT seq
+upstream
nt +downstream
nt
atggctgcgcgtcgcgcttcgtctgtttccgattctcccgttcccactcaagcgggcttg
ctgctccatcctcaatggctggattaccctcgtctggaaggtgtggctcgtcaggtcgcc
aagaaagcgcgttttcaggaccgggcaggcatacggcgcgtgtggctgaaagcctggcgc
ttgccgcaggacgccgcctttttcaatcagatcatcgctgccgaactgggtttgaaggat
gcggaccagcgtttacagtcccaaggtgtgcccgaggtcgtgattcgtaccctgcgcctg
ctgtatcaaatgagcgtggacaagctggaagcggatatttatgaagccttgcgtgagcaa
ctgcttgaacagcgcgctcaattggccggagcgatagcctcccagtccttgcctttaagc
gagaactggcccgaagccgagcgcggcccgcgcttgcaggctttagtgcaggcctggcag
tccatgcctttggcgcagacctatttgtggcagttacaggccgaacagcgcgatcgcgag
caacgcagtcagcgctgggagcaggcccaaaaagaacgtgaacaagcgcgtcaaaaagaa
caaaacgacaaacagcgcaagttcaatcaggcccaggagcgtttgacagcctggctgaaa
gagcaaggttgcgagccgcaacgcatcaccctggaggccttcgagggcctgcaagccggg
gaacctgcccattggttcatgaccgtgtatggccgcaatgccagtgccgctgtcttgacc
caggagttcaagctggatgccgagcagcaggagtttttgctgcaggctcaagcccaacgc
caggagcgtcagagagagcaacgacagcagcgttgggcttgggagcaggagtgcataggg
tcggaagaaacgatggccttgctgggcattactcgtcaggaatacgagctatggctggct
gatcgccgtttgcccagtaccaaactggaagtgcgtggcggagccgctggcggccgtgac
cgtgttgcccatcacccggatttattggcagcgattgatcaaagccagattgagcaatgg
cgcgagcaatacgccagcagcttgagcaatcgtgaacgtgcgcagtaccagcgagcggct
gaccgtgcgcgtacacaatggcgtcagcaacaagtgctgaaccagatcaagaagcaagaa
gcgtgcgattacgaaattgacccggaagatccattgcgcctgtggtggcacaaggatttg
tggctggcggtgaatgtgcccgtagcgggcgagcgtcagcattggcgcgccaatgtgcgt
atgcaggctgccgtgcctttgccacgtaccggctcggagctggatcgattgcccgctcgt
gtttcagtcttgttcaacacggcagctcaaaaccgtctgtcccagcgtctggaagattcg
ctggatgcgtttttgcaaacccagcgccccctgattgatggctcgtcctttctggaactg
gccaaagccttgcgcatggctctggaagagggcatcgagcaaaaagaaatcgaggccggg
gattttgaaaagcgtctgctcaatggcccggtgcgccgcatcctggaaagtgtggagcag
cagcgcgctcaagatttgatgcgcctgggcgacttcccggaaatgttcagcctggcccga
ggcatccgccgccatctggtgttccgtttgggcccgaccaattcgggcaagacgcacgag
gccctggaagctttgatggaagcccgatccggcgtgtatctggccccactgcgactgctg
gccatggaagtgcgcgatcgcctgatgaatgctggtatcccttgcaatctggtgacgggc
gaagagcgcgtgatggtgcccggtgcccagcacaccgcctgcacggtcgagatgatggac
cccacgatggaagtgcgtgtggccgtcctggacgagattcaaatgttgcaagacgagcag
cgcggttgggcctggacggcagccctggtcggtgttccggcccgtaccctgtttgtctgt
ggtgatgcttccgtcctgcgtccgtgcgagcgtctggtgcgctccatggaagagaccatg
gagctggaatttaccgaacgcaaaactcccctggaggtcatgccttacccagtggagccg
ccacgagcaacaggcaagcaagggcgtcataaagcgccgtggcgggggcgcaaagatcgt
cagcgtgaagctcagggtgtttccaaaggcgacgcggtggtggcctttacccgtaaggac
gtactgacgctcagtgctcgttaccgcgcccaaggctggaaagtcgccaccatttacggc
gcgctggctccggaagtgcgccgcaccgagtccgagcgcttttcccaaggcgaggccgat
gtgctggtagccaccgatgcgattggcatgggcttgaacctgccgattcgccgcgtcctg
ttctctacggttcacaagtttgacggccgctccatgcgagccttgaacgcaaccgaagtg
cgccagattgccggacgggcaggccgctatggcttgtaccccaaaggctatgtgggggcg
atggacaagcaggatctgaaccatattcgtacccaattgcaaagcgacgcccccagcgtg
gatttgcgcttgcccattgcacccagccccgagcacgtgcaggcgctggcctctttactg
gataacaacaatatcggcgctgtgttgcagtactttgcgcagaaagtggcttccgatagc
cccttgtttcagacagcgggcttgaaagacgccatcgagctgggcttttgtgtagaccgc
ctggctcccaagctggatttgcgcgagaagttcacctttgcctgcgcgccggtgtccgtg
gataaggatacggagctggattacttcaagcgttgcctgtctgcctatgtggcacaacgc
cccatggccttgccaccggcgccgtcctggctgaaatccgccagcccctcccgcctggaa
gacgccgaattgctcagcaagcagatcagcctttatgcctggttcagcatgaagttcccg
caagtgtttgaccaaggcccgtggttgccggaagtgcgctccctggtcagccgctttatt
gagcgcagcctgctgcatcaaagcggtttcggacagaccagccgcgaggcttttggtacg
ccgtcgccgagcagacgctga
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