Alcaligenes sp. NLF5-7: MID00_06770
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Entry
MID00_06770 CDS
T10407
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
alcn Alcaligenes sp. NLF5-7
Pathway
alcn03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
alcn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
MID00_06770
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
alcn03400
]
MID00_06770
Enzymes [BR:
alcn01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
MID00_06770
DNA repair and recombination proteins [BR:
alcn03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
MID00_06770
Prokaryotic type
MID00_06770
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
UTM03108
LinkDB
All DBs
Position
1440897..1441691
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AA seq
264 aa
AA seq
DB search
MARSSSQAPAAQLSLIGEELLSGNLLTENILNQIARLPSDWRATLDRPELQDILATLAKW
LDKECQDGASIYPAAPFRALELLPLQKVSVVILGQDPYHGPNQAQGLSFSVPDTCPAPPS
LRNIFKELELEYPDTALPNSHDLSNWGRQGVLLLNTSLTVEDGLPASHAKKGWEQITDSL
LMNLAQQTTRPIVYMLWGAHAQAKEALIQQHSQHPYLILKANHPSPLAARRPPVPFIGCG
HFQQANEWLKEQGVAPIQWFATGA
NT seq
795 nt
NT seq
+upstream
nt +downstream
nt
atggcccgctcatcttctcaagcccctgcggcacagctcagcctgattggtgaggaacta
ctctccggcaatctcctgaccgagaacatcctgaatcaaattgcccgccttcccagcgac
tggcgtgcaacattggatcgcccggagctgcaagacatattggcaactctggccaagtgg
ttggacaaggagtgccaggatggcgcctctatttatccggccgcccctttccgcgcactg
gagctgctgccattgcaaaaagtcagcgtagtgattctgggccaggatccttatcacggg
cccaatcaggcacagggcctgtcattttctgtgcctgacacctgcccggctccacccagt
ctgcgcaatatctttaaagagttggagctggagtatcccgacaccgccttgccaaacagt
catgatctgagcaactggggtcgacaaggtgtcttgctattgaatacatcgctgactgta
gaagatggtttgcctgcctctcacgccaagaaaggctgggagcagattactgactccctg
ctgatgaacctggcccagcagactacacgccctattgtttatatgttgtggggtgcccac
gcccaagccaaagaagcactgattcagcagcactcccagcatccttacctaattttgaaa
gccaatcacccttcccccttggctgctcgccgcccccctgttccttttattggttgcggt
catttccagcaagccaatgagtggctcaaggagcaaggcgtcgctcccatacaatggttt
gccaccggcgcttga
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