KEGG   Alcaligenes sp. NLF5-7: MID00_08365
Entry
MID00_08365       CDS       T10407                                 
Name
(GenBank) AMP-binding protein
  KO
K01897  long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
Organism
alcn  Alcaligenes sp. NLF5-7
Pathway
alcn00061  Fatty acid biosynthesis
alcn00071  Fatty acid degradation
alcn01100  Metabolic pathways
alcn01212  Fatty acid metabolism
alcn02024  Quorum sensing
alcn04146  Peroxisome
Module
alcn_M00086  beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:alcn00001]
 09100 Metabolism
  09103 Lipid metabolism
   00061 Fatty acid biosynthesis
    MID00_08365
   00071 Fatty acid degradation
    MID00_08365
 09140 Cellular Processes
  09141 Transport and catabolism
   04146 Peroxisome
    MID00_08365
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    MID00_08365
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01004 Lipid biosynthesis proteins [BR:alcn01004]
    MID00_08365
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:alcn04147]
    MID00_08365
Enzymes [BR:alcn01000]
 6. Ligases
  6.2  Forming carbon-sulfur bonds
   6.2.1  Acid-thiol ligases
    6.2.1.3  long-chain-fatty-acid---CoA ligase
     MID00_08365
Lipid biosynthesis proteins [BR:alcn01004]
 Acyl-CoA ligase
  Long/very long chain acyl-CoA ligase
   MID00_08365
Exosome [BR:alcn04147]
 Exosomal proteins
  Exosomal proteins of breast milk
   MID00_08365
  Exosomal proteins of breast cancer cells
   MID00_08365
SSDB
Motif
Pfam: AMP-binding AMP-binding_C
Other DBs
NCBI-ProteinID: UTM03408
LinkDB
Position
complement(1789463..1791127)
AA seq 554 aa
MDKVWLQNYPAGIPATIEDQAQQYSSLLDVFEQSCTEFAQRTAYISMGKRMSYRELSTNA
LALASWLQSQGVKKGDRVALMMPNMLQYPISLYGVLRSGATIINTNPLYTARELRHQLQD
SGAETIIIAENFAHVLQEILHETPIKRVIVTSVGDCLGGFKGWLVNQVVRHIKKGVPAWS
LPGSVSFKAVLAQGRGRTPAPVKLTHDDIACLQYTGGTTGVAKGAILTHGNLVSNLSQAL
SWIRPYLREGQIDCVVTALPLYHIFAFTANLLVFLRLGAENLLIINARDIPSMIKDMSKL
RFTAITGVNTLFNAMLNNAEFRKLDFSSLRFTLGGGMAVQEVVAKRWLEATGKPLAQAYG
LTETSPAATINPLDKKEFTGSIGLPVPSTDIRIRDENQNDLPLGKTGELCIRGPQVTPGY
WQRPDETAKVFDRDGFLRTGDIGYMDEQGYVFLLDRKKDMILVSGFNVYPNEVEAVAAQH
PDIVEAAAVGVPDEKAGEIVKLYVISRNPDLTEKDVIAFCRKNLTGYKAPRIVEFRDDLP
RTNVGKILRRELRP
NT seq 1665 nt   +upstreamnt  +downstreamnt
atggataaagtctggctgcagaactaccccgccggtattcctgccactatcgaagatcag
gcccagcagtactcgtccttgctggatgtatttgaacaaagttgtaccgagttcgcgcag
cgcactgcctatatcagcatgggcaaacgcatgagctaccgcgaactgtcgaccaatgcc
ctggcactggccagctggctgcaaagccaaggcgtgaaaaaaggcgaccgtgtcgccctg
atgatgcccaatatgctgcagtaccccatcagtctgtatggggtgttgcgcagcggggcc
accattatcaataccaacccgctgtatacggcccgtgaactgcgccaccagctgcaagac
agcggcgcggaaaccatcatcattgcggagaattttgcccacgtgctgcaggaaatcctg
cacgaaacacccatcaagcgagtcattgtgaccagcgtgggggattgtctgggcggcttc
aagggctggctggtcaatcaagtggtgcgccacattaaaaaaggtgtgcctgcctggtcc
ttgcctggctccgtctctttcaaagccgtactggctcaaggccgaggccgcacaccggcc
ccggtcaagctgacccacgatgatattgcctgcctgcaatacaccgggggcacgacgggc
gttgcaaaaggagccatcctgacccacggcaatctggtttcaaacctgagccaggccctg
tcctggattcgcccgtatttgagagaaggccagatcgactgcgttgttactgccctgccg
ctctaccatatcttcgctttcaccgcgaacctgctggtgtttctgcgtctgggtgcggag
aacctgttgatcattaacgcacgcgacattccctccatgatcaaggacatgtccaagctg
cgttttactgccattacgggggtgaacacgctctttaatgccatgctgaacaatgccgag
ttccgcaagctggatttctcctcgctacgttttacattgggtggcggtatggcagtgcag
gaagtggtcgccaagcgctggctggaagcaaccggcaaacctctggcccaggcttatgga
ctgactgaaacttcaccagcagccacgatcaatccgctggataaaaaagagttcactggc
tcaatcgggctgcccgttccttctaccgacatacgcatacgcgacgaaaaccagaacgac
ctgccgttgggcaaaacgggcgagctatgcattcgcgggccgcaagttactcccggctac
tggcaacgtcccgatgaaaccgccaaggtctttgatcgcgacggctttttacgcacgggc
gacattggctatatggacgagcaaggttatgtcttcctgctggatcgcaagaaagacatg
attctggtctcgggctttaacgtctaccccaatgaggtggaagccgtcgccgcccagcac
ccggatattgtcgaggccgctgccgtcggtgtaccggatgaaaaagcaggcgaaatcgtc
aagctctacgtcatcagccgcaatcccgatttgacggaaaaagacgtaatagccttctgc
cgcaagaacctgaccggctacaaggccccgcgcattgtcgagttccgcgacgacttgcca
cgtaccaacgtaggcaaaatcctgcgtcgggaactgcgtccataa

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