Alcaligenes sp. NLF5-7: MID00_08535
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Entry
MID00_08535 CDS
T10407
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
alcn Alcaligenes sp. NLF5-7
Pathway
alcn03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
alcn00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
MID00_08535 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
alcn03021
]
MID00_08535 (rpoA)
03400 DNA repair and recombination proteins [BR:
alcn03400
]
MID00_08535 (rpoA)
Enzymes [BR:
alcn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
MID00_08535 (rpoA)
Transcription machinery [BR:
alcn03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
MID00_08535 (rpoA)
DNA repair and recombination proteins [BR:
alcn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
MID00_08535 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RAD51D_N
Motif
Other DBs
NCBI-ProteinID:
UTM03440
LinkDB
All DBs
Position
1834359..1835342
Genome browser
AA seq
327 aa
AA seq
DB search
MSQGFLKPRSIEVEPISKNHAKVIMEPFERGYGHTLGNALRRILLSSMTGYAPTEVQITG
VVHEYSTLPGVGEDVVDILMNLKGVVFKLHSREEVTLILRKEGAGQVLASDIELPHDVEI
INPNHVIATLTDDGKLEMQIKVEQGRGYVPGNVRALADDRTHTIGRIVLDASYSPVRRVS
YAVENARVEQRTDLDKLVLDIETNGVISPEEAVRQSARILMDQISVFAALEGVGDAYEAP
VRGAPQIDPVLLRPVDDLELTVRSANCLKAENIYYIGDLIQRTENELLKTPNLGRKSLNE
IKEVLAARGLTLGMKLENWPPLGLERP
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
atgtctcaaggttttttgaaaccccgttccatcgaagttgaaccgatcagcaaaaatcac
gccaaggtgatcatggagcctttcgagcgcggctacggccacactctgggcaacgcactg
cgtcgtatcttgctgtcctccatgaccggctatgcacccactgaagtgcagattaccggt
gtggtgcacgagtactccacgctgccaggcgtgggcgaggacgtggttgatatcttgatg
aacctgaagggcgtggtcttcaagctgcacagccgtgaagaagttaccctgatcctgcgc
aaggaaggcgccggccaagttctggccagcgacatcgaattgccgcacgacgttgaaatc
atcaaccccaatcatgtgattgccaccttgaccgacgacggcaagctggaaatgcaaatc
aaggttgagcaaggccgtggctacgttcctggtaacgtgcgcgccctggctgatgatcgc
acccacacgatcggtcgtatcgtgctggatgcctcctacagcccagtgcgtcgtgttagc
tacgcggtcgaaaacgcccgtgtggaacagcgtactgacctggacaagctggttctggac
attgaaaccaacggcgtgatctcgcccgaggaagccgtgcgccagtccgctcgcatcctg
atggatcaaatctctgtgtttgctgctctggaaggtgtgggcgatgcctacgaagctcca
gtgcgtggcgctccacagatcgatcctgtgttgctgcgtcctgtcgacgatctggaactg
acggttcgttccgcaaactgcctgaaagccgaaaatatctactacatcggcgatctgatc
cagcgtaccgaaaacgaactgttgaagactccaaacctgggtcgcaagtccttgaacgaa
atcaaggaagtgttggctgcacgtggcctgactttgggcatgaagctcgaaaactggcca
ccactgggtcttgagcgtccataa
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