KEGG   Alcaligenes sp. NLF5-7: MID00_09575
Entry
MID00_09575       CDS       T10407                                 
Symbol
tssM
Name
(GenBank) type VI secretion system membrane subunit TssM
  KO
K11891  type VI secretion system protein ImpL
Organism
alcn  Alcaligenes sp. NLF5-7
Pathway
alcn03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:alcn00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    MID00_09575 (tssM)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:alcn02044]
    MID00_09575 (tssM)
Secretion system [BR:alcn02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   MID00_09575 (tssM)
SSDB
Motif
Pfam: IcmF-related_N IcmF-related IcmF_C IcmF_helical DUF3382 Wzy_C Ni_hydr_CYTB
Other DBs
NCBI-ProteinID: UTM03635
LinkDB
Position
2054705..2058304
AA seq 1199 aa
MTRLLSLVFSRSVWTFVGVLILLVLIWLLGPLLAIGQTRPLETEPSRWIAMAVVVVFWLL
RLLWRSWREGRLNAQLLGQLSRPAQKASASSNTATPHPLQSQFDEAIELLKRIRFGSHMG
GRLRSLLSRQYVYQLPWYVFIGAPGAGKTTALVNSGLQFPLSERYGKTSLRGVGGTRNCD
WWFTDEAVLLDTAGRYTTHESDPVGDEQEWRGFLGLLKRYRRRQPINGTLLTISVPDLLS
STAAQRHDHAQVLRQRLAELRERLGIQFPIYVLVTKMDLLQGFQEYFDHCDRQELEQVWG
FTLPYESSREAGFSLSHTYGREYEALHQRLERGLAAVMAEQPNESVRAEAYLLPQQFARL
GPVLEEFLEQVFSQSRFEAPLLLRGVYFTSGRQGGVRLDQVRDSMREYLEVDVQADQAQP
VAGQGRSYFLTQLLKELIFQEAGVAGRDERWERRVRLRHFLVYGLVAVGVLLLGLAWSRS
FLLNRSYVEQVEGRVPQAQQQADQTQVLDTTPAVGLLPLLDMLSLLPQSDQFPLNAPGLE
RRMGLYQGDKMKAAADTVYQRALEKLLAPLLARRIETVLRSEQAQDLEYGYEALRAYLML
YDTRRYDAAHLQTWLLGSLKQDLPAGFTQSQYDRLESHVRAVTQAGLLLNPFPRNEALIE
QSRERLARISLEQRTYSRMRRILAATPGLIPMSVSGMAGPYAASVFKRESGKPLTEGIDG
LYTYEGYWTVVEPRIDSELQQMREDDRWILGLDTGAGQSEAARRAASQELRRLYLLDYVR
VWDEYLADLRLLQGGSLLENIQLARTLSMADSPLKQLVQQVALQTRLLREDAQQGASLGA
QAKVRLDDTRQALEQMFGPVGLEGSRRNEPQAKQVEAIVDQHFEPYHRLASSSGGAPAPI
DGTLELLDEFYAFLTSSDAALRSAGTPPQSNVLTKLQAEAGRLPGPLRDALDQFSVGASA
EIASRTQASLGQLVNATIGQFCRSAIAGRYPFAAQSRQDVAPNDFARMFAPGGLMDAFFQ
EHLMHQVDMSGGRWRFKPGIDGQAAANFRYLDAFQRAAVIRDVFFPAGSNQPRIDMAFTP
VQLDAELSQVLLDVDGQVLRYAHGPQVAMGVQWPGPRGGRQVSLEAQPQSEGSGMRATGA
WALLRLLDKAQPVSGASAGAQRLSFALGGRQFVVDVVANSSKNPWRLAEMRGFSCPGSH
NT seq 3600 nt   +upstreamnt  +downstreamnt
atgacacgtcttttgagtctggtctttagccgtagcgtctggacctttgtgggtgtgctg
attctgctggtgctgatctggttgctggggcctttgttggcgattggccaaacccggcca
ttggaaaccgagccgtcgcgctggattgcgatggctgtggtggtggtgttctggttgctg
cgcttgttgtggcgcagctggcgtgaaggccgcttgaacgcgcagttgctaggccaatta
agccgcccggcgcagaaggcatcagcatcgagcaatacggctacgccgcatcctttgcaa
agccagtttgatgaggccatcgaactgctcaagcggattcgcttcggttcgcatatgggc
ggacgcttgcgctccttgctgtcgcgtcagtacgtgtatcagttgccctggtatgtgttc
atcggtgcacccggagcaggtaaaaccacagcgctggtcaattccggcttgcagtttccc
ttgtcggagcgctacggaaaaacgtctctgcgaggggtggggggcacgcgcaattgtgac
tggtggtttaccgacgaagccgtcctgttggatacggcagggcgctacaccacgcatgaa
agtgatccggtgggggatgaacaggaatggcgtggtttcctgggcctgctcaagcgctat
cgccgcaggcagccgataaatggcactttgctgactatcagcgtgccagatttgttgtcc
agcacggccgcgcaacgtcacgatcatgcgcaggtcttgcgccagcgcctggctgaattg
cgcgagcgtttggggattcagtttcctatctatgtgctggtcaccaaaatggatttgctc
cagggctttcaggagtatttcgaccattgtgatcgtcaggaactggagcaggtctggggc
ttcaccttgccttatgaaagctcgcgcgaagcgggattttccttgtcgcatacctatggg
cgcgagtacgaagccttgcatcaacgcctggagcgtggtctggcggccgtgatggccgag
cagcccaacgaaagcgtgcgtgccgaagcctatctgctgccacaacagtttgctcgcctg
gggccggtgctggaggagtttctggaacaggtgtttagccagtcccgcttcgaggcaccc
ctgttgctgcgcggcgtgtacttcaccagtggtcggcaaggaggtgtgcgtctggatcag
gtgcgggactccatgcgcgagtatctggaagtggatgtgcaggcggatcaagcgcagcca
gtggccggtcagggccgcagctactttctgacccagctgctgaaagagctgatctttcag
gaggccggtgttgcaggccgcgacgagcgctgggagcgccgcgtgcgcttgcgtcatttt
ctggtctacggtctggtggcggtgggtgtgttgctactggggctggcctggagtcgcagc
tttctgttgaaccgcagctatgtggagcaggttgaaggacgtgttccgcaggctcagcaa
caggcggaccaaacacaggtgctggataccaccccggcggtcggcttgctgcctttgctg
gatatgttgtcgttgctgccgcaaagcgatcagtttcccttgaatgcgcccggtttggag
cggcgcatgggcctgtatcagggtgacaagatgaaggccgctgccgataccgtctaccaa
cgcgctttggagaaattgctggcccccttgctggcgcgtcgtatcgaaaccgtgttgcgt
agcgagcaggcgcaggacctggagtacggctacgaggccctgcgcgcctatttgatgcta
tacgacacgcggcgctatgacgctgcccatttgcagacctggttgctgggcagtttgaag
caggacttgccggctggctttacccagtcgcaatacgacaggctggagagccatgtccgt
gcagtgacgcaggcgggcttgctcttgaatcccttcccgcgcaatgaagccttgattgaa
caaagccgggaacgtctggcgcgtatcagtctggagcagcgcacttatagccgcatgcgc
cgtattctggccgccacacccggtttgatacctatgtcggtctcaggcatggccgggcca
tacgcggcctctgtattcaagcgcgaaagtggcaaaccgttaaccgaagggatagacggt
ctgtacacctacgaggggtactggaccgtggttgaaccacgtatcgacagcgaattgcag
cagatgcgcgaggatgaccgctggattctggggctggatacgggcgcagggcagtccgag
gcggcgcgtcgtgcggcaagccaggagctgcgtcgtctgtatctgctggattatgtgcgt
gtgtgggatgagtatctggctgatttgcgcctgctgcaaggcggcagcttgctggaaaac
attcagttggctcggaccttgtccatggccgattcgcccttgaagcagttggtccagcag
gtggctttgcaaactcgtctgttgcgagaggatgcgcagcagggggcctccttgggggca
caagccaaagtgcggctggacgatacccggcaggcgctggagcagatgtttggcccggtc
gggttggagggtagtcgccgtaatgagcctcaggccaagcaggtagaggccatcgtggat
cagcacttcgagccttatcaccgcctggcttccagtagtggcggggcaccagcgcctatt
gatggaaccttggagttgctggatgagttctatgcttttttgacctcctcggatgctgct
ctgcgcagcgcgggtacaccgccgcagtccaatgtcttgaccaagttgcaggcagaggca
ggtcggttgcctgggcctttacgtgatgcgctggatcagttttcggtaggtgcttctgcc
gagatcgcgtcgcggactcaagccagtttggggcagttggtaaatgccactattggtcag
ttttgccgtagtgcgattgccggtcgatatcccttcgccgctcaatccaggcaggatgtc
gcacctaatgattttgcccgcatgtttgcgccgggtggcttgatggatgccttttttcaa
gagcatctgatgcatcaggtggatatgtcaggtggacgctggcgtttcaaaccgggcata
gatgggcaggcagcggccaacttccgttatctggatgcgtttcagcgtgcggctgtgatt
cgggatgtgttcttcccggcaggcagtaatcaaccgcgtattgatatggcgttcactccg
gttcagctggatgcagaactgtcgcaagtgctgctggatgtggatggccaggtgctgcgt
tatgcccatggcccacaggttgccatgggggtacagtggccggggccgcgcgggggccgt
caggtcagtctggaggcacagccacagtccgaaggctcggggatgagggcgaccggtgcc
tgggcgctgctgcgcttgctggacaaggcacagcctgtatcgggcgcgtctgccggggcc
cagcgcttgtcctttgccttgggaggtcgccagtttgtggtggatgtggtggccaatagc
tccaaaaatccgtggcgtttggcggagatgagagggtttagctgcccggggagccactga

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