Alcaligenes sp. NLF5-7: MID00_09770
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Entry
MID00_09770 CDS
T10407
Name
(GenBank) ligand-gated channel protein
KO
K16089
outer membrane receptor for ferrienterochelin and colicins
Organism
alcn Alcaligenes sp. NLF5-7
Brite
KEGG Orthology (KO) [BR:
alcn00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
alcn02000
]
MID00_09770
Transporters [BR:
alcn02000
]
Other transporters
Pores ion channels [TC:
1
]
MID00_09770
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Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
OMP_b-brl_3
OMP_b-brl_4
Porin_4
DUF481
Motif
Other DBs
NCBI-ProteinID:
UTM03673
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Position
complement(2112500..2114482)
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AA seq
660 aa
AA seq
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MKSLFTVKRLPLVLAGAFAASGAVAQESTPVQLSPVVVTASGFEQDIKEAPASITVITRE
DLENKFYRDAYDALQDVPGVIVTGGGDRRDITIRGMSSKYTLILIDGKRQSSTETRTNSD
SSGVEGGWTPPLSEIERIEVVRGPMSSLYGSDAMGGVINIITRKVPKEWGGSIRLDSTLQ
SHSRSGDIFQGNFMLGGPIKDGVLGLQVYGQQTNRKEDDIYNGYRKRESFEVGAKLSLTP
SENHSFVLEGSTKRQKYNSTLGKTVEPIAPGTACGRSGCPASSETDYRGEKVSLTHSGNW
GFATSDTYVQQEDFNNKSRDMRIKNTDARTAWVAPLGDHLLTLGASYQHQKLNDETGNQL
TTGINRIKRTQWSLFMEDEWSLTNSFALTGGLRYDHDENFGKHFSPRIYGVWSATDNWTI
KGGVSTGFRAPDLRQTIPGWGQVSRGGNMYGNPDLKPEKSLSQELGVMYDSLEGFSAGVT
LFNNDFKDKITRVACPASKCTDGPNQFGSDPTTYENVDKAVTRGIETNFSWDLAQDWTLK
ANYTYTHSKQKSGPNEGQPLNQMPKHMANVSLDWHPTEKINTWARVNYRGKESEPVTSAS
SSTTRAPSYTFVDLGGTYKLNKNVDLYAGIYNILDKQIRYDDYGYVEDGRRYWLGVGLRF
NT seq
1983 nt
NT seq
+upstream
nt +downstream
nt
atgaaatctctatttaccgtaaagcgcttgccgctcgttctggcaggcgcttttgctgct
agtggtgccgttgctcaagaaagcacacccgtccaactcagcccagtggttgttaccgcc
tcgggctttgagcaagacattaaagaagctcctgcgtcgattaccgtcattacccgcgaa
gacctggaaaacaagttctaccgtgatgcctacgacgctctgcaagatgtgcctggcgtc
attgtgactggcggtggtgaccgtcgcgacatcaccattcgcggcatgagctccaaatac
acactgatcctgatcgacggcaaacgccaaagctcgacagaaacccgcaccaactcggac
tcctccggtgtggaaggcggctggacccctcccctgtccgaaattgaacgtatcgaagtg
gtgcgcggccccatgtcctcgctgtatggctccgacgccatgggcggtgtgatcaacatc
attacccgcaaagtgcccaaggaatggggcggttccattcgcctggatagcaccttgcaa
tcgcacagccgctcgggcgatattttccagggcaatttcatgctgggtggcccgatcaag
gatggcgtgctgggcttgcaagtctatggacaacaaaccaatcgcaaagaagacgatatc
tacaacggttatcgcaagcgtgagtcctttgaagtcggtgccaagctgagcctaaccccg
tcggaaaaccacagctttgtgctcgaaggcagcacaaagcgtcaaaaatacaattccacc
ttgggcaagaccgttgagccaattgctcccggcactgcttgcggacgctccggttgccct
gccagttccgagacagattaccgcggtgaaaaggtctctttgactcacagtggcaactgg
ggatttgcaacctctgacacctacgtgcaacaggaagacttcaacaacaagtcgcgtgac
atgcgtatcaaaaataccgatgcacgtactgcatgggttgcccccctgggcgatcatctg
ctgacgctgggtgcctcctaccagcatcaaaaactgaacgacgaaactggtaaccagctc
acaactggaatcaaccgtatcaaacgcacccaatggtcgctattcatggaagacgagtgg
agcctgaccaacagcttcgccctgaccggcggcctgcgctacgaccacgacgagaacttc
ggcaaacacttcagtccacgtatctatggcgtgtggtctgccacagacaactggactatc
aaaggcggtgtatccaccggcttccgtgcacctgacctgcgtcaaaccatccctggttgg
ggccaagtcagccgtggtggcaatatgtacggtaaccctgacctgaagccagaaaaatcg
ctgtcgcaagaactcggcgtcatgtatgacagtctggagggcttctccgctggcgtgact
ttgtttaataacgacttcaaggacaagatcactcgcgttgcatgtccggccagcaaatgt
accgacggccctaaccagtttggttccgaccccactacttacgagaacgtggacaaggcg
gtaacccgtggtattgaaaccaacttcagctgggatctggctcaagactggaccttgaag
gccaattacacctacacccattccaagcaaaagagcggtcctaacgagggtcagcctctg
aatcaaatgcccaagcacatggcaaatgtcagtctggattggcaccctacagaaaaaatc
aacacatgggctcgcgtgaactaccgtggcaaagaaagtgaaccagtcacctctgcctct
tcctcgacaacacgagctccgtcctacacctttgtagatctgggtggcacctacaaactg
aacaaaaacgtagacctgtacgcgggtatctacaatattttggataagcaaatccgctac
gatgattacggctacgtcgaagatggtcgtcgctactggctgggtgtaggtttgcgtttc
taa
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