Alcaligenes sp. NLF5-7: MID00_10175
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Entry
MID00_10175 CDS
T10407
Symbol
rsmB
Name
(GenBank) 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB
KO
K03500
16S rRNA (cytosine967-C5)-methyltransferase [EC:
2.1.1.176
]
Organism
alcn Alcaligenes sp. NLF5-7
Brite
KEGG Orthology (KO) [BR:
alcn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
alcn03009
]
MID00_10175 (rsmB)
Enzymes [BR:
alcn01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.176 16S rRNA (cytosine967-C5)-methyltransferase
MID00_10175 (rsmB)
Ribosome biogenesis [BR:
alcn03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
MID00_10175 (rsmB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Methyltr_RsmB-F
RsmF-B_ferredox
Methyltransf_31
FtsJ
NusB
Methyltr_RsmF_N
Motif
Other DBs
NCBI-ProteinID:
UTM03747
LinkDB
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Position
2210724..2212073
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AA seq
449 aa
AA seq
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MSDTHLSPSLPLSEVMLLSARNIEGVLAGKSLTESLAATPAPARAAVQSVSFHVLRRLGH
ARQIRITLVPRQPSNTWLDALLMVSLALLDTAMRVQEDARTFEDRPDVPVYAVHTVVDQA
VRAADSQAALRLSKGLVNGVLRRFTRERKMILSQVQSRPEARWNHPGWWVKELRRAYPRD
WEALLQAANRPGPLTLRVNQRRCSVERLQAVLTEAGIASSSPGTGAVTLDKAMPVQAIPG
FDLGWWSVQDWSAQQAGLLLPVKDGMRVLDACAAPGGKTAHLLEQADVSLLALDSDGERL
ERVGHNLRRLGLASDKVQLKRGDAARPAQWWDGQPFDAILADVPCTASGIVRRHPDIRWL
RRESDIADTARLQSSILDALWSTLRPGGHFLYSTCSIFPAEGEQQVEAFLARHPEAQLLD
SPGQILPGVAGRSLVDGDGFFYALFTRPV
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
gtgtccgacacccatctttccccctctttgcccctgtccgaagtcatgctgctgagcgcg
cgcaatattgaaggcgtgctggcaggcaagtccctgactgaaagcctggctgcaacgcca
gcgccagcccgtgcggcagtgcagtctgtcagcttccatgttttgcgccgtctgggccat
gcccgtcagattcgtatcacgctggtgccgcgccagcccagcaatacctggctggatgcc
ttgctgatggtgtcgctggccttgctggatacagccatgcgcgtgcaagaggatgccagg
acttttgaggatcgcccggatgtgccggtctatgccgtgcatacggtggtggatcaggct
gtgcgtgcggctgatagccaggctgcgctgcgtctgtccaagggcttggtgaacggggtg
ctgcgtcgctttacacgcgagcgcaagatgatcctgtctcaggtacagagccgtcccgaa
gcacgctggaatcatcctggctggtgggtcaaggaattgcgtcgtgcttacccacgtgat
tgggaagcgttgttgcaagcggctaatcgccccggtcctttgaccttgcgtgtgaatcag
cgtcgttgctcggtggagcgcttgcaggcggtgctgacggaagccgggattgcgtccagc
agccccggcacgggtgccgttaccttggacaaggccatgccggttcaggcgattcctggg
tttgatctgggctggtggtcggtgcaggactggtcggctcagcaagccggtctgcttttg
ccggtcaaggatggcatgcgcgtgctggatgcttgcgcggccccgggtggcaagaccgct
catttgctggagcaggcggatgtttccttgttggccctggactcggacggcgagcgtctg
gagcgcgtaggtcataacctgcgtcgtctgggcctggccagcgacaaagttcaattgaaa
cggggcgatgcggctcgtcctgcccagtggtgggatggtcagccctttgatgccatcctg
gctgacgtgccttgtaccgcttcgggtattgtgcgtcgtcaccccgatattcgctggttg
cgccgcgagtcggacattgccgataccgcgcgtttgcaaagctctatactggatgccttg
tggtccacattgcggcccggcgggcatttcctgtattcgacctgctcgattttcccggct
gaaggggagcaacaggtcgaggcatttctggcccgtcaccccgaggcgcagcttttggac
tctcctggccagattttgcccggcgttgcgggacgatcgctggtagatggcgacggtttt
ttctacgccttatttacgcgcccggtttga
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