Alcaligenes sp. NLF5-7: MID00_11125
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Entry
MID00_11125 CDS
T10407
Name
(GenBank) methylated-DNA--[protein]-cysteine S-methyltransferase
KO
K01247
DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
alcn Alcaligenes sp. NLF5-7
Pathway
alcn03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
alcn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
MID00_11125
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
alcn03400
]
MID00_11125
Enzymes [BR:
alcn01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
MID00_11125
DNA repair and recombination proteins [BR:
alcn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
MID00_11125
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_binding_1
HhH-GPD
Methyltransf_1N
HTH_IclR
Motif
Other DBs
NCBI-ProteinID:
UTM00061
LinkDB
All DBs
Position
complement(2416911..2418146)
Genome browser
AA seq
411 aa
AA seq
DB search
MTRLPSKPDTSSRYREAEQFLAALDPDWQALVAHVGPCIHQPRPERDPYEALIRSVVYQQ
LHTRAAERILQRLIDIYPHGHCPTPEEVLATPYDTLRACGLSGAKANSILGLAQARLDGI
IPDQATALQMPDEELIKRLTTLRGIGRWTVEMMMMYTLEHEDILPADDFGVREGYRNLKQ
LDKAPSARVLREIGQAWAPYRSVASWYLWRMPKQAPALAPSSNKVNRAPRSQDKPVRQQT
PSSPLYFAIAQCSLGTLLVAESERGICAISLADDAKVLLEQLQEQFKAAELIEADPQFNQ
RVAQVVAMVEEPTLGLDLPLDIQGTPFQQRVWEFLRHIPVGQTLSYTEIAERLGMPKGAR
AVARACATNTLAIAIPCHRVVRQSGDLAGYRWGLERKKTLLERERPQKAQR
NT seq
1236 nt
NT seq
+upstream
nt +downstream
nt
atgactcgccttccatcaaaaccagacacatccagccgctaccgcgaggccgaacaattc
ctggccgcactggaccccgactggcaagcgctggtcgcccacgtgggcccttgcatccat
cagccacgccccgagcgcgacccttacgaagccctgatccgctctgttgtgtatcagcag
ttgcatacccgggcggctgagcgcatcctgcaacgcctgattgatatctatccgcacggc
cattgcccaacgcccgaggaagtgctggcgacgccgtatgacaccctgcgcgcttgtggc
ttgtccggtgccaaagccaatagcattctgggcctggcccaggctcgcctggatggcatc
attcccgaccaggccaccgctttgcaaatgccggatgaagagctgatcaagcggctgacc
acgctgcgcggcataggtcgctggacggtggaaatgatgatgatgtacacgctggagcat
gaagacattctgcccgcggacgactttggggtgcgcgagggctatcgcaatttgaagcag
ctggacaaggctccctcagcccgtgtcttgcgtgaaattggccaagcttgggcaccctac
cgcagcgtggcttcctggtacttgtggcgcatgcccaaacaggcgccagcattggcacct
tcttcgaacaaggtaaatcgcgccccgcgctcgcaggacaagcccgttcgccaacaaact
ccaagtagccctctttattttgcgattgcccaatgcagcttgggtacattgctcgttgcc
gaaagcgagcgcgggatttgtgcgatttccctggccgatgatgccaaagtcttgctggaa
cagttgcaagagcaattcaaggccgctgagctgatcgaagccgatccgcaattcaatcaa
cgagtggcccaggtcgttgccatggtagaagagccgaccctgggcttggatctgcccctg
gacatccagggcaccccttttcaacaacgtgtctgggagtttctacgtcatatcccagta
ggccagaccttgagctataccgagattgccgaacgtctgggcatgcccaaaggcgcccgt
gccgtggcacgagcctgcgccaccaacaccttggccattgccatcccctgccatcgggtc
gtgcggcaaagcggggatctggcaggctatcgttggggcctggagcgcaagaaaaccttg
ctggagcgcgaacgcccccaaaaggctcagcgctga
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