Alcaligenes sp. NLF5-7: MID00_11360
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Entry
MID00_11360 CDS
T10407
Name
(GenBank) LysR substrate-binding domain-containing protein
KO
K21703
LysR family transcriptional regulator, low CO2-responsive transcriptional regulator
Organism
alcn Alcaligenes sp. NLF5-7
Brite
KEGG Orthology (KO) [BR:
alcn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
alcn03000
]
MID00_11360
Transcription factors [BR:
alcn03000
]
Prokaryotic type
Helix-turn-helix
LysR family
MID00_11360
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
PBP_like
HTH_28
pPIWI_RE_Y
HTH_50
Motif
Other DBs
NCBI-ProteinID:
UTM00105
LinkDB
All DBs
Position
complement(2468807..2469691)
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AA seq
294 aa
AA seq
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MSAARLRAFLAVARHGSFSAGARALGLAQPTVTKQIQGLEQQHDVELFHRRGRGIQLTQV
GLALLPVAQQLGALEIDAFNLLHDSGKLHVGRLRIGAVGPFHVIEMVEAYHKLFPGVDIS
IHMGNSAEVLADLADYATDIAVLAGACEAPAFHTEHYASHAVILFAPLSHPLAQHDSVPL
SALQDAPLLQRESGSTTRACLEAALEKEHIRPRAVMEIGSREALREAVARGLGVGTVSEA
EFIPDHRFKAVRIQGDPVRTDTYLYCLAERRDSRMIAQFFTEALALRKQIQTTT
NT seq
885 nt
NT seq
+upstream
nt +downstream
nt
atgtccgccgcacgcctacgtgcctttctggctgttgcccgccacggcagcttcagcgcc
ggggctcgcgccctgggactggcccaacccaccgttaccaaacagattcagggcctggaa
caacaacacgatgtcgagctttttcatcgccgggggcgcgggattcagctaacccaggtc
gggctggccctgctgcccgtggcacagcaactgggggctctggaaatagatgccttcaac
ctcctacatgacagtggcaagctgcacgtggggcgcttgcgcattggggccgtggggcct
tttcatgtgatcgaaatggtagaggcctaccacaagctgtttccaggggtggatatctcc
attcatatggggaactcggccgaggtgctggccgacctggccgactatgccaccgatatt
gccgtgctggccggagcctgcgaggccccggcttttcacaccgagcactacgccagccat
gctgtcattctgttcgcccccttgtcgcaccctttggcccagcacgacagcgtgcctctg
tccgccctgcaggatgcgccgttattgcagcgggaatcgggctctaccacacgggcctgt
ctggaagcagcactggaaaaggagcatatccggccccgcgccgtcatggaaattggtagt
cgggaggccttgcgggaagccgtcgcccgagggctgggcgtcggtacggtatccgaggcc
gaattcattccggaccatcgtttcaaagccgttcgtattcagggagaccccgtgcgcacc
gacacgtatttatattgcctggccgagcgccgggacagccgcatgattgcccaatttttc
acagaagctttggcattacgcaagcaaatacaaacgactacatag
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