Alcaligenes sp. NLF5-7: MID00_11805
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Entry
MID00_11805 CDS
T10407
Name
(GenBank) ribonuclease Z
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
alcn Alcaligenes sp. NLF5-7
Brite
KEGG Orthology (KO) [BR:
alcn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
alcn03016
]
MID00_11805
Enzymes [BR:
alcn01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
MID00_11805
Transfer RNA biogenesis [BR:
alcn03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
MID00_11805
Prokaryotic type
MID00_11805
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Anti-Pycsar_Apyc1
Lactamase_B_2
Lactamase_B
Lactamase_B_4
Motif
Other DBs
NCBI-ProteinID:
UTM00190
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Position
2571816..2572709
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AA seq
297 aa
AA seq
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MKITMLGTGAALPDPDRAQSSILVTLENGKNYLFDCGEGSTRQMVKANINPADVPWVFLS
HLHYDHVCGLPFFVLSSWVFNREGKLKVFGPKGTQDFVDHSFENGAFRVDIQARAAYPAR
QKNIEAVRPEVFEVEPGLMYEDEDVKIYIDVVDHIPSEITDCFGMRMEAEGKVVAFSGDT
APCESMIRLAQDADLLIHECTFPESFLKHRAQSGVGTFAHTSPLQLGEIARKANVKSLVA
THFGHYDSTSPVIKRAAGNHLPVDLMGPERLDEVARDIRKSYKGDLRLATDLMRIDL
NT seq
894 nt
NT seq
+upstream
nt +downstream
nt
gtgaagataaccatgcttggcaccggcgctgcgttgccagatcccgatcgtgctcagtcg
tccattttggtgacgctggagaatggcaagaattatctgtttgattgcggcgaagggtcc
acgcgtcagatggtgaaggccaatatcaatccagccgatgtgccttgggtgtttttaagc
catctgcactatgaccacgtttgcggtctgcctttttttgtactgtccagctgggttttt
aaccgtgaaggcaagctgaaggtttttggccccaaaggcacgcaggattttgtggatcat
tccttcgagaatggcgcgtttcgtgtggatattcaggctcgtgcggcttatccggctcgt
cagaaaaatattgaagcggtacgccccgaggtcttcgaggtggagccaggtctgatgtac
gaggacgaggacgtcaaaatctacattgatgtggtggaccacattcctagcgaaattacg
gactgctttggtatgcgtatggaggctgaaggcaaggttgtggcgttcagtggcgacacg
gctccgtgtgagtccatgattcgcctggcgcaggatgcggatctgctgatacatgagtgc
acttttccggagtctttcctgaagcatcgcgcgcagtcaggggtaggcacgtttgcccat
accagtcctttgcagttgggcgagatcgctcgtaaagccaatgtgaagagtttagtggcc
acgcattttggacattacgactccaccagtccggtgattaaacgtgcggcgggcaatcat
ttgccggttgatttgatggggccggagcgtctggatgaagtggctcgggatattcgcaaa
agctacaaaggcgatttgcgtttggcaacggatttgatgcgcatagacctgtaa
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