Alcaligenes sp. NLF5-7: MID00_12040
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Entry
MID00_12040 CDS
T10407
Symbol
groL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
alcn Alcaligenes sp. NLF5-7
Pathway
alcn03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
alcn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MID00_12040 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
alcn03019
]
MID00_12040 (groL)
03110 Chaperones and folding catalysts [BR:
alcn03110
]
MID00_12040 (groL)
03029 Mitochondrial biogenesis [BR:
alcn03029
]
MID00_12040 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
alcn04147
]
MID00_12040 (groL)
Enzymes [BR:
alcn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
MID00_12040 (groL)
Messenger RNA biogenesis [BR:
alcn03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
MID00_12040 (groL)
Chaperones and folding catalysts [BR:
alcn03110
]
Heat shock proteins
HSP60 / Chaperonin
MID00_12040 (groL)
Mitochondrial biogenesis [BR:
alcn03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
MID00_12040 (groL)
Exosome [BR:
alcn04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
MID00_12040 (groL)
Exosomal proteins of other body fluids (saliva and urine)
MID00_12040 (groL)
Exosomal proteins of breast cancer cells
MID00_12040 (groL)
Exosomal proteins of colorectal cancer cells
MID00_12040 (groL)
Exosomal proteins of bladder cancer cells
MID00_12040 (groL)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
UTM00237
LinkDB
All DBs
Position
complement(2625354..2627000)
Genome browser
AA seq
548 aa
AA seq
DB search
MTAKQVYFGDDARTRIVRGVNILANAVKTTMGPKGRNVVLDRSFGAPTVTKDGVSVAKEI
ELKDKFENIGAQLVKEVASKTSDNAGDGTTTATVLAQAIVEEGLKFVAAGINPMDLKRGI
DKAVGVVVDELRQLSRPCTTSKEIAQVGSISANSDHSIGEIIANAMDKVGKEGVITVEDG
KSLENELDVVEGMQFDRGYLSPYFINNADKQVAVLDDPFVLIFDKKISNIRDLLPVLEQV
AKTSRPLLIVAEDVEGEALATLVVNNIRGILKTTAVKAPGFGDRRKAMLEDIAILTGGTV
ISEETGMSLEKATLDDLGQAKRIEVAKENTTIIDGAGNGTDIEARVKQIRVQIDESTSDY
DREKLQERVAKLAGGVAVIRVGAATEVEMKEKKARVEDALHATRAAVEEGIVPGGGVALI
RARAAVAQLKGDNTDQDAGIKLILRAIEAPLRTIVSNAGEEASVVVNQVASGTGTYGYNA
ATGEYGDLVEQGVLDPTKVTRTALQNAASIASLLLTTEVAVTEIVEDKPAPAMPDMGGMG
GMGGMGGF
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atgaccgcaaaacaagtttacttcggcgacgacgcacgtacccgcatcgtacgcggcgtc
aatattctggctaacgctgttaagaccaccatgggccccaaaggccgtaacgttgttctg
gaccgctctttcggcgctcctaccgttactaaagacggtgtgtccgttgccaaagaaatc
gaactgaaagacaagttcgagaacatcggtgctcaactggttaaagaagttgcttccaaa
acttccgacaacgccggtgacggtaccactaccgctactgtgctggcccaagccatcgtt
gaagaaggcctgaagtttgttgccgcaggcatcaacccaatggacctgaagcgcggtatc
gacaaggctgttggcgttgtggttgacgaactgcgtcaactgtcccgtccttgcaccacc
agcaaagaaattgctcaggtcggttccatttccgccaacagcgaccactccattggtgag
atcatcgccaatgccatggacaaagtgggcaaagaaggcgtaattaccgttgaagacggc
aagtccctggaaaacgaactggacgtggtcgaaggtatgcagtttgaccgcggctacctg
tccccttacttcatcaacaacgctgacaagcaagttgctgttctggacgatccgtttgtt
ctgattttcgacaagaaaatctccaacatccgtgacctgctgcccgtactggagcaagtt
gccaagaccagccgtcctttgctgatcgttgctgaagatgtggaaggcgaagccctggct
actctggttgtgaacaacatccgtggcattctgaagactaccgccgttaaagctcctggc
tttggcgatcgtcgcaaagccatgctggaagacatcgctatcctgactggcggtaccgtg
atctccgaagaaaccggtatgtccctggaaaaagcgactctggacgacctgggtcaggcc
aagcgcattgaagtggccaaagaaaacaccacgatcatcgacggcgctggcaacggcacc
gacatcgaagctcgcgtgaaacaaatccgcgttcagatcgacgagtccacttccgactac
gaccgtgaaaaactgcaagagcgcgtggccaagctggctggcggtgttgccgtgattcgc
gttggcgctgccaccgaagtcgaaatgaaagagaagaaagcccgcgttgaagacgccctg
cacgctactcgcgcagccgtcgaagaaggtatcgttcctggcggtggcgttgcactgatt
cgtgcccgcgcagctgttgcccaactgaaaggcgacaacaccgaccaagacgccggtatc
aagctgatcctgcgtgctatcgaagctcctttgcgcaccatcgtttccaacgccggcgaa
gaagccagcgtggttgttaaccaagtggccagcggcaccggcacctacggttacaacgct
gctactggcgaatacggtgacctggtcgagcaaggcgttctggacccaaccaaggtgact
cgcactgccctgcaaaacgcagcttcgatcgccagcctgttgctgaccaccgaagtggcc
gtgaccgaaatcgtggaagacaaacctgctccagccatgcctgacatgggtggcatgggc
ggcatgggtggtatgggcggcttctaa
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