Alcaligenes sp. NLF5-7: MID00_12660
Help
Entry
MID00_12660 CDS
T10407
Name
(GenBank) YadA-like family protein
Organism
alcn Alcaligenes sp. NLF5-7
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YadA_stalk
YadA_head
YadA_anchor
ESPR
Phage_T7_tail
Crescentin
Motif
Other DBs
NCBI-ProteinID:
UTM00349
LinkDB
All DBs
Position
2747466..2753408
Genome browser
AA seq
1980 aa
AA seq
DB search
MNHVYKTIWNEQTGTFVAVSEHKKAKGKRSSSCVKGGKRASFSARMGWLALLTASALAMS
NAWAAVEIPGDGQSNLIDFTSPGGTIRFTGGGGSIVGLSSLMISGALSADQITVGGESVA
TQAQLNATSAEVQTNTGKIDGLEGRVTSNESTLTDHGTRITDNETAIMAHDSRIAGNETA
IAAHDTRIGATETGLVTVNDRLIALGVDETNPGVKYFRANSELPDSEANGEESIAIGPES
KAEGDRSIAAGQGALADADSAIALGDGASVASADSRPKPEAAIAIGKDSRSSGLASVAVG
REAAASGNNALALGMQAQASGANGIALGLGAQADAENNISIGNGAGQATGNHLPGDRSHN
IAIGQASGQNVKGQFNVALGDGTGNGVDGNENVAIGRDAGLNVIGDSNVSLGKNANRGLS
SNRAIGIGEDSGAETEGVAIGYKAIAGNTGVAMGRQTTALGTGTAIGPNAHADSNFVALG
LNSHAAQNDVSGLSKFTNRGFNGSAVSVGSSQSGSEFTRRIVNVEDGANETDAVNVRQLQ
SAVDQVTLGATVDYEKLAEKVGEDWGQQIADSKPRYFSVNDGGVDKGNKNNNGAAATAID
SIAIGPDATAKEKDSVAIGHMAGAEGASSVVLGHNIKGLGLNSTTIGNSQSEARDESGVA
IGTHVVSRDKNSIVIGRDSYTDRQANGPSVENSIVIGTESSSTAVEGIVIGKNSVVNAAR
GIAQGSNATATANDAMAFGTRSRAAAGDSQASGTDAKAFAARGIAMGTNARSGQSNPDVE
NQDKNRDSIALGTDSIAQFNSSIAVGREAQATADFAQAQGKGAHAFGEASIAQGRDAWAL
ERQAIALGDGSRSTADRAVAIGQGSKALNARSVALGDGAETAGAVGTLNASLNGLNYGNF
AGDRPVATVSVGTEQEKRTVTNVAAGRISASSTDAINGSQLYATNSVLGNVANTTKNILG
GNATLASNGNLSMSNIGDTGENTVHDAIKYAAQGWNVSANGAMAENVKPGGSVDFSNDDD
NIVISRDGTDLAFNLADDLTVGNSITVGDTVINGDSVTTNNLTVTGETHLGDSFVVQNTG
DVIYKGNEIATQADGLSFAGNTGSTIAKTLSDDTPLTISGELAEGAESTGANLRVDSDGN
KLNLVMAQNLTDLNSITINNGGPVINGAGINMNGKKITNLAKGTDDTDAVNVSQLKDVEE
VANAGWNISANGAAAENVKPGASVDFSNDDGNITVTRDGTDLAFNLADDLTVGNSITVGD
TVINGDSVTVGDTIVNGDSVTTNNLTVTGETHLGDNFVVQSGGDVIYKGSEIATQADGLS
FAGNTGDAIAKTLGDNTPLTISGELAEGAESTGTNLRVDSDGNKLNLVMAKDLTDLNSIT
INNGGPVINDAGINMNGKKITNLAKGTDDTDAVNVSQLKEVSEVANAGWNISANGGATEN
VKPGASVDFSNTDGNINISRDGTDLAFNLNKDIDLGADGSLKTGNTVVNNDGLTVDDGAG
NKTSTTAAGTTVSNAAGDTTTVGAGSITVADAAGNSTAIGSTQVVVGGANPVTINGDTGR
IGGLTNLTWDPDNYTSGQAATEDQLKQVNDVASAGWNVTDADGNSANIGPNGQVAFVGDK
NVTVEQTGTDDSGQVEVKLNKDIDLGADGSLKTGDTVINNAGVAVGNDVHLGNTGLTINN
GPSITLAGINAGDMRITNVAAGRNPTDAVNYGQLQPIESFIGLDGNGSFAYNGGQHSSLK
DVLDSMHWNVEAPTDGKEGGNTGGSNGNGSGSTGGGNNGSGDGTPIHNGNTVGFVEGDNI
VISKTDRVNDAGQTVGADIKVSVSQDLKVNSITAVNVQADEIQINNGGPIINENGINMSG
KHITNVAAGVNDTDAVNVSQLNQVAGNLQGQINNIRHDINRLDNRLSAGVAAAMATASLP
QAYLPGKHMMSMAGGTWRGESGMAIGFSGITDNGKWVYKLSGNTTSRGDYGGAVGIGYQW
NT seq
5943 nt
NT seq
+upstream
nt +downstream
nt
atgaatcacgtctataaaaccatctggaatgagcaaacgggaacatttgttgccgtttct
gagcacaagaaagccaaaggcaagcgcagttcctcgtgcgtcaaaggaggaaagcgtgcg
tctttttccgcacgcatgggatggctcgccttgttgacagcaagcgcattggcgatgagc
aatgcctgggcggcagtcgagattccaggcgacggtcagagcaacctcattgacttcacc
agcccaggcggcaccattcggtttacgggtggtggtggcagcatcgtggggttgagtagc
ctgatgatctccggcgccttgagtgccgatcagattacggtgggtggtgagtctgtggcg
acccaggcgcagctcaatgctacgtccgctgaggtgcagaccaataccggcaagattgat
gggctggaagggcgggtcacgagcaatgagtccactctgacggatcatgggactcgcatt
acggacaatgaaacggccatcatggcccatgacagtcgaattgcgggcaacgaaaccgcc
atcgctgcacatgacactcgaattggcgctactgaaacagggttggtgactgttaacgat
cgtctgattgccttgggagtggatgaaaccaatcctggcgtgaagtatttccgtgcgaac
tcggagctgcctgattccgaggcgaatggtgaagaatccattgcaattggccctgagtcc
aaggcagagggggatcgcagtattgctgcaggacaaggtgcgctggccgacgccgacagc
gcgattgcattgggtgacggtgccagtgtcgccagcgcagacagtcgacccaaaccggag
gcagccattgccattggaaaggatagtcggagcagcggtttggccagcgttgcggtaggc
cgcgaagcagcggcaagtggaaataatgcgcttgccttgggtatgcaggcacaggccagt
ggggctaacgggatcgccttgggtttaggtgctcaggctgatgcagaaaacaatatctct
atcggtaatggcgcaggccaggccactggcaatcatctgccgggtgatcgttcgcacaat
attgccatcggtcaggccagtggtcagaacgtcaaaggtcagttcaatgtggcgctgggt
gatggcaccggcaatggcgtggatggcaacgaaaacgtggcgattggccgagatgccggc
ctgaatgtcataggcgatagcaatgtcagcctgggcaagaatgcgaatcgggggctgtca
tcaaaccgtgcgatcggtattggtgaggactccggcgctgaaacagaaggcgtggcgatt
gggtacaaggcgattgccggtaataccggggtcgcgatgggtcgtcagacaacggcattg
ggaacgggtactgccattggccctaatgctcatgctgacagcaatttcgtagccctgggg
ttgaactctcatgccgcgcaaaacgatgtgtctggcttgagcaagttcaccaatagaggc
ttcaatggcagtgccgtttccgttggtagcagccagtcgggcagtgagttcacacgtcgt
attgtgaacgtggaagacggtgccaatgagaccgatgcagtgaacgtgcgccagttgcag
tcggctgttgatcaggtgacgctgggtgcgactgtggattatgaaaagctggccgagaag
gttggcgaggactggggccagcagattgccgatagcaaacctcgttacttcagcgttaat
gatggtggtgtcgacaagggcaacaagaacaataacggtgctgctgcaacagccatcgac
tcgattgccatcggccctgatgcaactgccaaggaaaaggactcggttgctattggacat
atggcaggggcagagggagcgtcatctgttgtgctgggacacaacatcaaaggcttgggg
ctgaattccacgactatcggtaactcccaatccgaagcgcgggacgagagcggcgtggca
atcggtacgcacgttgtcagccgtgacaagaactccatcgtcattggccgggattcctac
acagatcgccaggcaaacggtccctcggtcgagaactcgattgtgatcggtacagaatcc
agttctacagccgtggaagggattgtgatcggtaaaaactcggtggtgaatgcggctcgc
ggcatcgctcagggtagcaatgcgacggcaacggctaatgacgctatggcgtttggcacc
cgatcacgggcggctgccggtgattcccaggccagcggtacggatgccaaagcctttgcg
gcacgcggtattgcaatgggtactaacgctcgctccggccagtctaatcctgatgtcgaa
aatcaggacaagaaccgcgactccattgcgctgggtacggactccattgcccagttcaat
agcagcattgcggtaggtcgcgaagctcaggccaccgctgattttgcacaggcacagggc
aagggtgcacatgcctttggcgaggcatcgattgcacaaggccgtgacgcttgggcgctt
gagcgtcaggcaatcgcgctgggtgacggctcccgcagcacggccgatcgtgctgtcgct
attggacagggttcaaaggcgctcaatgcacgctcggtagcgctgggtgatggtgcagaa
acagcaggcgcggttggcaccttgaatgcttctttgaacgggctgaactacggcaacttt
gccggagatcgtcctgttgctaccgtcagcgtgggtacggagcaggaaaaacgcacagtg
acgaatgtggccgcgggccggatcagcgccagcagcacagatgcgatcaatggcagccag
ttgtatgccacgaattcggtgctgggcaatgtagctaacaccacgaaaaacattttgggt
ggcaatgccacgctggcctctaatggcaacctgagcatgagcaatatcggagataccggt
gaaaacacggtgcacgatgcgatcaagtacgcggctcaaggttggaatgtgagtgccaat
ggtgccatggctgagaacgtgaagccgggtggttcggtagacttcagcaatgatgacgac
aacatcgttatctcgcgtgatggcaccgatctggctttcaatctggccgatgatctgact
gtgggtaatagcatcactgtaggcgataccgtgatcaacggtgacagcgtcacgactaac
aatctgactgttacgggcgaaacccatttgggtgacagctttgttgtccaaaacaccggg
gatgttatctacaagggcaacgaaattgccacccaggctgatggcttgagctttgcgggc
aacaccggcagcaccattgccaagacgctgagtgacgacacaccgctgaccatctccggc
gaactggccgagggagcagagtccacgggtgccaacctgcgtgttgatagtgacggcaac
aagctgaatctggtcatggctcagaacctgacggatctgaatagcatcaccatcaataac
ggtggtccggtgatcaacggtgccggcatcaatatgaacggcaagaaaatcaccaatcta
gccaaagggacagacgacaccgatgcggtgaacgtgtcgcagttgaaggatgttgaagag
gttgccaacgcaggctggaacatcagcgccaatggtgctgccgccgagaacgtcaaaccc
ggagcatcggtggacttcagcaatgacgacggcaacatcaccgtgacgcgcgatggcacc
gacctggctttcaatctggccgatgatctgactgtgggtaatagcatcactgtaggcgat
accgtgatcaacggtgacagcgtcacagtaggtgacacgatcgttaatggcgacagcgtc
acgaccaacaatctgactgttacgggcgaaacccacctgggtgacaactttgttgtccaa
agcggtggtgatgttatctacaagggcagcgagatcgccacccaggctgatggcttgagc
tttgccggcaataccggcgacgcgattgccaaaacgctgggtgacaacacaccgttgact
atctcgggtgaactggccgagggcgcagagtccacgggtacgaacctgcgtgttgatagt
gacggcaacaagctgaacctggtcatggccaaggatctgacggacctgaacagcatcacc
atcaataacggtggtccggtgattaacgatgccggcatcaatatgaacggcaagaaaatc
accaatctggccaaaggtacagacgacaccgatgcggtgaacgtatcgcagctgaaagaa
gtttcagaggttgccaacgcaggctggaacatcagcgcgaatggtggtgctactgaaaac
gtgaagcctggcgcctcggtggacttcagtaacacggacggcaacatcaacatttcgcgt
gatggcacggacctggccttcaacctgaacaaggatattgatctgggcgcagacggtagc
ctgaagacgggaaacacggtcgtgaacaacgacggtctgaccgtggatgatggggcaggt
aacaagacctccacgactgcggcaggcaccacggtcagcaatgccgccggtgacacgact
accgtaggcgcaggttcgatcacggtggcagatgcggccggtaacagcacggctatcggc
agcacgcaggtcgtggtgggcggagcaaacccggtcacgatcaatggtgataccggccga
atcggcggactgaccaatctgacttgggatccggacaactacaccagcggtcaggcggcg
accgaagatcagctcaagcaagtcaatgacgttgccagcgctggctggaatgtgaccgat
gcggatggcaatagcgccaatattggcccgaacggccaggttgcctttgtcggtgacaag
aatgtcacggttgagcagactggcaccgatgattccggacaggttgaagtcaagctgaac
aaggacattgatctgggagcagatggcagcctgaagaccggcgataccgtcatcaacaac
gcaggggttgcggtaggaaacgacgtacatctgggtaacaccggcctgaccatcaataat
ggcccgagcatcaccctggctggcatcaacgcaggtgatatgcgcatcaccaatgttgcc
gccggtcgcaatccgaccgatgccgtcaattatggtcagctccagcctatcgagtccttc
attggtctggatggaaacggctcgtttgcctacaacggtggccagcactcctccttgaaa
gatgttctggacagcatgcactggaatgttgaagcaccgacggatggcaaggaaggcggc
aatactggtggttccaacggcaatggttccggctccacaggtggtggcaataatggctcc
ggtgacggcacgcctatccataatggcaacacggtgggctttgttgaaggggacaacatc
gttatctccaagacggaccgggtcaatgatgcaggccagaccgttggcgctgatatcaag
gtatcggtatcccaggatctgaaggtcaattccattacggcagtgaatgttcaggccgat
gaaattcagatcaataacggtggcccgatcattaacgagaacggcatcaatatgtccggc
aagcacatcaccaatgtggcggcgggcgtgaatgacaccgatgcggtcaacgtaagccag
ttgaatcaggtggcgggcaatctgcaaggtcagatcaacaatattcgccacgatatcaat
cgtctggataaccgcttaagtgcaggtgtggcggccgcgatggcaacagcgtctctgcct
caggcttacttgccgggcaagcacatgatgtccatggccggcggtacctggcgtggagag
tccggtatggccattggtttctccggtattaccgataacggtaagtgggtttacaagctc
tcgggcaataccacctcgcgcggtgattacggtggtgccgtgggtattggttatcaatgg
taa
DBGET
integrated database retrieval system
