Alcaligenes sp. NLF5-7: MID00_13055
Help
Entry
MID00_13055 CDS
T10407
Symbol
dbpA
Name
(GenBank) ATP-dependent RNA helicase DbpA
KO
K05591
ATP-dependent RNA helicase DbpA [EC:
5.6.2.6
]
Organism
alcn Alcaligenes sp. NLF5-7
Brite
KEGG Orthology (KO) [BR:
alcn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
alcn03009
]
MID00_13055 (dbpA)
Enzymes [BR:
alcn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
MID00_13055 (dbpA)
Ribosome biogenesis [BR:
alcn03009
]
Prokaryotic type
rRNA helicases
MID00_13055 (dbpA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
Cas3-like_C_2
CMS1
P-loop_SecA
ERCC3_RAD25_C
Motif
Other DBs
NCBI-ProteinID:
UTM03834
LinkDB
All DBs
Position
complement(2848580..2849968)
Genome browser
AA seq
462 aa
AA seq
DB search
MPHTSFSTLPLLPALLETLDSLGFEKMTAIQEQSLPLILQGRDLIAQAKTGSGKTAAFGL
GLLQTLNPSKLTPQALVICPTRELADQVTTELRRLARQIPNVRMLTLCGGVPSRPQTEAL
RNGAHVVVGTPGRIQDHLERGNLDLSALKTLVLDEADRMVDMGFHDDIVAIASHCPPRRQ
TLLFSATYPENIRKLSARFLKNPAEVKVEALHDASQIEQIFYEVHPEQRLSAVVTLLEHF
RPASTLIFCNTKMRCQEVVEELQSEGIQALALTGDLEQRDRDEILVQFSNQSCAVLVATD
VASRGLDIQNLGAVINVDVTKDSEVHIHRVGRVGRGDQKGLALNLVSRSEQRWVKLIEEF
QGSEVKWSNLKGLRPQSKEPLRAPMMTLEIQGGKKDKLRPGDLLGALTRDVGLKGEQVGK
IAITDARSYVALDRKIARQYFDRIANANIKGRRFRMRFVEDK
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
gtgccccatacctctttcagtacccttccccttctgcccgccttgcttgaaaccctggat
agcctgggttttgaaaaaatgacggccattcaggaacaaagcctgcccttgattctgcaa
ggccgcgacctgatcgcccaagccaagaccggcagcggcaaaaccgccgcgtttggcctg
ggtctgttgcaaaccctcaaccccagcaagctgactccgcaagccctggtgatctgcccc
acgcgcgagctggccgatcaggtcaccacggaactgcgtcgtctggcccgccagattcct
aacgtgcgcatgctgactttgtgcggtggtgtgccttcacgtccgcaaaccgaagccttg
cgcaacggtgcgcacgtggtggtgggaacgccgggccgtattcaggaccatctggagcgc
ggcaatctggacttgtccgccctgaaaacattggtcctggacgaagccgaccgcatggtg
gatatgggctttcacgatgacatcgtggccattgcctcgcactgcccaccacgccgtcaa
accctgctgttctcggccacttatccggaaaatatccgcaagctcagcgcccgctttctg
aaaaaccctgcagaagtcaaagtggaagcgctgcacgatgccagccagatcgaacagatc
ttttatgaagttcatcctgagcaacgtctatctgccgtggtgaccctgctggagcacttc
cgccccgcctctaccctgattttctgcaacaccaagatgcgttgccaggaagtggtggaa
gaactgcaatccgaaggcatccaggccctggctctgaccggcgacctggaacaacgtgat
cgcgacgagattctggtgcagttctccaaccagagctgtgccgtgctggtcgcgaccgat
gtggcgtcacgcggtttggacattcagaatctgggggccgtcatcaacgtagacgtcacc
aaagacagcgaagtgcatatccatcgcgtgggtcgggtcggccggggtgatcagaaaggc
ctggccctgaatctggtttcgcgcagcgaacagcgctgggtgaagttgatcgaggagttc
cagggcagcgaagtgaaatggagcaatctgaaaggcttgcgccctcagtccaaagagccg
ctgcgcgcacccatgatgacgctggaaattcagggtggcaaaaaagacaagctgcgcccc
ggcgacctgcttggtgccctgacccgcgatgtgggcctgaaaggcgagcaggttggcaag
attgcgattaccgacgcccgttcctacgtggcgctggaccgcaagattgcacgtcaatat
tttgaccgcattgccaacgccaacatcaaaggccgacgctttcgcatgcgctttgtagaa
gataaataa
DBGET
integrated database retrieval system
