Alcaligenes sp. NLF5-7: MID00_15940
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Entry
MID00_15940 CDS
T10407
Name
(GenBank) HU family DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
alcn Alcaligenes sp. NLF5-7
Brite
KEGG Orthology (KO) [BR:
alcn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
alcn03032
]
MID00_15940
03036 Chromosome and associated proteins [BR:
alcn03036
]
MID00_15940
03400 DNA repair and recombination proteins [BR:
alcn03400
]
MID00_15940
DNA replication proteins [BR:
alcn03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
MID00_15940
Chromosome and associated proteins [BR:
alcn03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
MID00_15940
DNA repair and recombination proteins [BR:
alcn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
MID00_15940
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_1
HU-CCDC81_euk_2
MvaT_DBD
Barstar
Motif
Other DBs
NCBI-ProteinID:
UTM00974
LinkDB
All DBs
Position
3461837..3462109
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AA seq
90 aa
AA seq
DB search
MNKTELIEFISTKADLSKADAGRALDAFIDAVTTTLKEKDTVTLVGFGTFAVSERAARSG
RNPRTGETIEIEGANVPKFRPGKALKDAVN
NT seq
273 nt
NT seq
+upstream
nt +downstream
nt
atgaataaaaccgagcttatcgaattcatttccaccaaagccgatctgtccaaagctgac
gctggtcgtgcactggatgcgtttatcgatgccgtgaccaccacgctgaaagaaaaagat
acggttactctggttggttttggcaccttcgctgtgtcggaacgcgctgcccgttcgggt
cgtaacccacgtaccggtgaaaccatcgagatcgaaggcgcaaacgtgcccaagttccgt
cccggtaaggctctgaaagacgctgtgaattaa
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