Alcaligenes sp. NLF5-7: MID00_19990
Help
Entry
MID00_19990 CDS
T10407
Symbol
soxR
Name
(GenBank) redox-sensitive transcriptional activator SoxR
KO
K13639
MerR family transcriptional regulator, redox-sensitive transcriptional activator SoxR
Organism
alcn Alcaligenes sp. NLF5-7
Brite
KEGG Orthology (KO) [BR:
alcn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
alcn03000
]
MID00_19990 (soxR)
Transcription factors [BR:
alcn03000
]
Prokaryotic type
Helix-turn-helix
MerR family
MID00_19990 (soxR)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MerR_1
MerR-DNA-bind
MerR
HTH_IclR
HTH_17
HTH_31
LacI
TetR_N
Motif
Other DBs
NCBI-ProteinID:
UTM01735
LinkDB
All DBs
Position
4311705..4312193
Genome browser
AA seq
162 aa
AA seq
DB search
MRIDTSIPLSVGEVARRSGVTIATVHHYETKGLIHGWRSDGNQRRYHRNVLRKIAVIKIA
QRAGIPLATIKTALDELPTGRPLNAKDWATLSTSWRDMLNERILSLTQLRDELDGCIGCG
CLSMTDCPLRNPGDQLSLSGAGAVLLDAGRHNQKRKKRAGEI
NT seq
489 nt
NT seq
+upstream
nt +downstream
nt
atgagaatcgataccagcatccctctgtcagtgggtgaagtcgcccgccgcagcggggtc
accattgcaaccgtgcatcactacgaaaccaaaggtctcattcatggctggcgtagcgat
ggtaaccagcgccgctatcaccggaatgttctacgaaaaattgcggtcatcaaaattgca
cagcgcgccggcattccactggctaccatcaaaacagccctggatgaattacctactggc
cggccactgaacgcaaaggactgggccaccttgtccacgagctggcgggatatgttgaat
gagcggattctcagcctgacacagctacgcgatgagctggatggctgtataggctgtggg
tgtttgtccatgacggactgcccacttagaaacccgggggatcagttatccctgtcaggc
gcgggtgctgtgctgcttgatgccggacgacacaatcagaagcggaagaaaagagcgggg
gaaatctga
DBGET
integrated database retrieval system
