Alcaligenes sp. NLF5-7: MID00_20055
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Entry
MID00_20055 CDS
T10407
Symbol
dapE
Name
(GenBank) succinyl-diaminopimelate desuccinylase
KO
K01439
succinyl-diaminopimelate desuccinylase [EC:
3.5.1.18
]
Organism
alcn Alcaligenes sp. NLF5-7
Pathway
alcn00300
Lysine biosynthesis
alcn01100
Metabolic pathways
alcn01120
Microbial metabolism in diverse environments
alcn01230
Biosynthesis of amino acids
Module
alcn_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
alcn00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
MID00_20055 (dapE)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
alcn01002
]
MID00_20055 (dapE)
Enzymes [BR:
alcn01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.18 succinyl-diaminopimelate desuccinylase
MID00_20055 (dapE)
Peptidases and inhibitors [BR:
alcn01002
]
Metallo peptidases
Family M20
MID00_20055 (dapE)
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Paralog
GFIT
Motif
Pfam:
Peptidase_M20
M20_dimer
Peptidase_M28
PhyR_sigma2
Motif
Other DBs
NCBI-ProteinID:
UTM01747
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Position
4323751..4324887
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AA seq
378 aa
AA seq
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MSTDNSVLDTLKALIARPSVTPEDAHCQQWLGARLEQAGFSLEHLPSGPVSNLWARRGTQ
APLFVFAGHTDVVPTGPEAAWDSPPFEPTVRDGQLYGRGAADMKASIAAFIHAVEEFTQA
HPEHKGSIALLLTSDEEGPATDGTVHVCRVLKERGEQLDYCIVGEPTCSRQLGDTIKNGR
RGSLSGHLIVKGRQGHVAYPQLAINPLHVFSPALHELTDRMWDAGNIDFPPTSFQISNIH
AGTGAGNVIPGQLDVHFNFRFSTEQTPAGLQAEVESILRRHGVDFQLEWTLGGEPFLTEA
GPLSQALAKAIETETGVETDLSTTGGTSDGRFIAKICPQVVEFGPLNASIHQINEHVAVA
DLEPLKNIYRRTLESLLC
NT seq
1137 nt
NT seq
+upstream
nt +downstream
nt
atgagcactgacaattctgtactagacaccctcaaagccctgattgcccgcccctcggtc
acccctgaggacgcccactgccagcaatggctgggcgcaaggctggagcaagcgggcttt
agcctggaacatctgcccagcggcccggtgtccaatctgtgggcccgccgtggcacccag
gcgcccttgtttgtttttgccggtcacacagacgtggttccgaccgggccggaagcggcc
tgggactcgcccccgtttgagcccaccgtgcgcgacggtcagctgtatggccgtggtgcg
gcggatatgaaagcctcgattgcggccttcatccacgcagttgaggaatttacccaggcc
catcctgaacacaaaggctcgattgccctgctgctgacttcggatgaagaaggccccgca
accgacggcaccgtgcatgtgtgccgtgtcctgaaagagcgtggcgaacaactggactat
tgcatcgtgggcgagcccacctgctcgcgccaattaggtgacaccattaaaaatggccgt
cgcggctccctgtccggtcacttgatcgtaaagggtcgccaaggccatgtggcgtacccg
cagttggccatcaacccgctgcatgtattctcccctgcactgcacgaactgacagaccgc
atgtgggacgccggcaatatcgacttcccgcccaccagctttcagatttccaatatccat
gccggcaccggggcgggtaatgtgatccccggtcaactggatgtgcatttcaacttccgc
ttctccaccgagcaaacacctgccggcctgcaagccgaagtggaatccatcctgcgccgc
catggtgtggatttccaactggaatggacactgggtggcgaacccttcctgactgaggcc
ggaccgctaagccaagctcttgccaaggccattgaaaccgaaaccggcgtggaaaccgat
ctgtccacgacaggcggcacctcggatggccgctttatcgctaaaatctgccctcaagtg
gtcgaatttggcccgctcaacgccagcatccatcaaatcaatgaacacgttgctgtggct
gatcttgagcctcttaaaaacatttatcgccgtacattggaatccctgctttgttaa
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