Alcaligenes sp. NLF5-7: MID00_20270
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Entry
MID00_20270 CDS
T10407
Symbol
xseA
Name
(GenBank) exodeoxyribonuclease VII large subunit
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
alcn Alcaligenes sp. NLF5-7
Pathway
alcn03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
alcn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
MID00_20270 (xseA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
alcn03400
]
MID00_20270 (xseA)
Enzymes [BR:
alcn01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
MID00_20270 (xseA)
DNA repair and recombination proteins [BR:
alcn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
MID00_20270 (xseA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
tRNA_anti-codon
Baculo_PEP_C
Fzo_mitofusin
Motif
Other DBs
NCBI-ProteinID:
UTM03882
LinkDB
All DBs
Position
complement(4374436..4375731)
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AA seq
431 aa
AA seq
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MNRRVSQLLDEHMPVVWVSGEVSNFTQAASGHWYFSIKDDKAAVRAVMFRGRAQAVGFVP
RAGERFEFRCSVTLYEARGDFQVQVEGMRRAGLGDLHEAFLRLKGQLQSEGLFEPERKRP
IATLPRSIGIITSLAAAALRDVLTAMERRAPHVRIIIYPAPVQGAEAPPRLRQALETAIE
RAEVDTLLLVRGGGSLEDLWAFNDEGLARLIAASPIPIISGVGHETDFTIADFVADLRAP
TPTAAAELACLGRDQLLEQVFARMGALSHGVQRHLDRASLRLDRAVAKLVSPHQRLAQQQ
QRLDHLTQRLQRVARSVPDTAALRLTTLRARLERSIPQLTSRQQNLNMLFQRLEKGLDHA
LVLRRQRLAAAQQTLQALSPRLIINRGYAIVRDSEGKVVKNALDLKIGERLDVELSRGHV
SVDVVRTHDLL
NT seq
1296 nt
NT seq
+upstream
nt +downstream
nt
ttgaatcgccgtgtcagccagttgctggacgagcacatgcccgtcgtttgggttagcggt
gaagtgtccaactttacccaggccgcttccgggcattggtacttttccatcaaggatgac
aaggcggctgttcgtgccgtgatgtttcgggggcgagcccaggccgtgggatttgtgccg
cgtgcgggcgagcgcttcgagtttcgttgctcggttaccttgtacgaggcacgcggagac
ttccaggttcaggtggaaggcatgcgccgcgccgggctgggggatttgcacgaagcgttt
ctgcgtctgaaggggcagttgcaaagcgaaggcctgttcgagccggaacgcaagcgtcct
attgccaccttgccgcgcagcataggtattatcacttccctggcagccgcggccttgcgg
gatgtcctgactgcgatggagcgtcgtgctccgcacgtgcgcatcattatttatcctgct
ccggtccaaggagcagaagcaccgccgcgattgcggcaagctctggaaaccgcgattgag
cgggccgaggttgatacgctcttgctggtacgtgggggcggtagcctggaagatctctgg
gcttttaacgacgaaggtctggcgcgtctgatcgcggccagtcctatccctattattagt
ggggtggggcacgagacagacttcaccattgctgattttgtagctgacttgcgcgcaccc
acgccaaccgccgccgccgaactggcctgtctggggcgcgatcagttactggaacaggtg
tttgcgcgcatgggcgcgctgagccacggtgtgcagcgtcatctggatcgggcctctctg
cgtctggatcgggcggtagccaaattggtctctccgcatcaacgcctggcccagcagcag
caacgtctggatcatctgacccaaaggctgcaacgtgtggctcgcagcgtccccgatact
gctgcgttgcgcctgactaccttgagggcgcgtttggagcgcagcattcctcagctgacg
tcaagacagcaaaatctgaatatgcttttccaacggctggaaaaaggtctggatcatgcg
ctggttttgcgtcgccagcgcctggccgcggcccagcaaacgctgcaagccttgtccccg
cgccttatcatcaatcgtggatatgccatagtcagggatagcgaggggaaagttgtaaaa
aatgcgttagacttaaagattggtgaacgactcgatgtcgagttgagtcgcggtcatgtg
tcggtggatgtggtgcgcacgcacgatctgctctag
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