Alcaligenes sp. NLF5-7: MID00_20390
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Entry
MID00_20390 CDS
T10407
Name
(GenBank) ABC transporter ATP-binding protein
KO
K02052
putative spermidine/putrescine transport system ATP-binding protein
Organism
alcn Alcaligenes sp. NLF5-7
Pathway
alcn02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
alcn00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
MID00_20390
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
alcn02000
]
MID00_20390
Transporters [BR:
alcn02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
MID00_20390
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
TOBE_2
AAA_21
AAA
SMC_N
NACHT
AAA_22
AAA_28
AAA_29
AAA_14
Rad17
NB-ARC
ORC-CDC6-like
AAA_16
RsgA_GTPase
ATPase_2
AAA_5
TOBE
AAA_18
nSTAND_NTPase5
AAA_25
PduV-EutP
MobB
AAA_23
TsaE
Motif
Other DBs
NCBI-ProteinID:
UTM01808
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Position
4398616..4399680
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AA seq
354 aa
AA seq
DB search
MENKHVPVRIEHCAKTYADGTRGLHPSTLDITPGEVMALLGPSGCGKTTLLRLIAGLEMP
DAGSRILFDGQDVTHLPIEKREVGMVFQHYALFPNMTVEANIGYGPKIKGMDPAARQKLV
GELVELMRLNGLEKRQPSALSGGQRQRVAIARAIANQPRVLLLDEPLAALDAKLKVSLRD
ELAELLRRLRITAIHVTHDQQEAFAIADRLAVMHEGRIIQIGDGESLYRHPAHPFVATFL
GRVNVLQRNEQSLLNNEIRLADLSLTCPETLRGAQELLVRPEDISVCMDTPSGWARAKVR
QRSFMGGRVQLTLDVDGQAPLTAEVDRDHGAVLGSTVGIHINPGKLMPGTVPLS
NT seq
1065 nt
NT seq
+upstream
nt +downstream
nt
atggaaaataaacacgtaccggtgcgtatcgaacactgcgccaaaacctatgccgatggc
acacggggtttgcatcccagcaccctggacatcacccccggtgaagtcatggctttgctg
gggccctcgggctgcggcaagaccaccttgctgcgactgatcgccggcctggaaatgccc
gatgccggcagccgcattctgttcgacggccaggacgtcacccatctgccgattgaaaag
cgtgaggtcggcatggtgtttcaacattacgccctgttcccgaacatgacggtggaagcc
aatatcggctatggcccgaagatcaagggaatggatccggccgctcgccaaaaactggtg
ggtgagctggtcgaactgatgcgcctgaacggtctggaaaaacgccagccctccgccttg
tcgggtgggcaacgacaacgagttgccatcgcacgtgccattgccaatcaaccccgcgtt
ctgctgctggacgagccgctggccgccctggatgccaagctgaaagtctccttgcgcgac
gagctggccgagctgctgcgacgcctgcgtatcacggccattcatgtgacccacgatcag
caggaggcttttgccattgccgaccgtctggccgtcatgcacgaaggccgcatcattcag
attggcgatggcgaaagcctgtaccgccatccggcccacccttttgtcgccaccttcctc
ggacgggtcaacgtcctgcaacgcaacgaacaaagcctgctcaataacgagatccgtctg
gcagacctgagcctgacttgccccgagaccttgcgcggggcgcaggagttactggttcgc
ccggaagacatcagcgtttgcatggatacacccagcggctgggcacgtgccaaagtgcga
caacgcagttttatgggcggacgggtgcaactgaccctggacgtggacggacaagcccct
ctgactgccgaggtagaccgtgatcacggagccgtccttggcagtacagtgggaattcac
atcaaccccggcaagctgatgcccggtaccgtcccactctcttaa
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