Alcaligenes sp. NLF5-7: MID00_20450
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Entry
MID00_20450 CDS
T10407
Name
(GenBank) exonuclease domain-containing protein
KO
K10857
exodeoxyribonuclease X [EC:3.1.11.-]
Organism
alcn Alcaligenes sp. NLF5-7
Pathway
alcn03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
alcn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
MID00_20450
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
alcn03400
]
MID00_20450
DNA repair and recombination proteins [BR:
alcn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
MID00_20450
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
QSregVF_b
ExoX-like_C
DUF2199
Motif
Other DBs
NCBI-ProteinID:
UTM01820
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Position
4409822..4410508
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AA seq
228 aa
AA seq
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MTALSVSDSRMSALLFDTETTGTAKPQVIEAAWLRLSDPVFLLVNEEFEQRYRPDEANSL
GALATHHIYDEELQDCPSHTEFKLPADTQYIIGHNVDYDWGVAGSPNIKRICTLALARHL
IPGLDSYSQSALIYHIDRANARERLRNAHSALADVRNCLALLQYLLGLTQNINTWEQLWQ
LSEHARIPTILHFGKHKGMAIADVPQDYKNWLLRQPDLDPYLVKALKV
NT seq
687 nt
NT seq
+upstream
nt +downstream
nt
atgacggctttgtctgttagcgattcccgtatgtctgccctgctgtttgatactgaaacc
accggcactgccaaacctcaagtcatcgaggcagcctggctgcgtttaagcgaccctgtc
ttcttgctggtcaatgaagaattcgagcaacgctaccggcctgatgaggccaattctctg
ggtgcgctggccacccaccacatttacgacgaagagctgcaagactgcccgtcgcatacc
gagttcaagctgcctgccgacacccaatacatcattggccataacgtggactacgactgg
ggcgtggccggttcgcccaatatcaagcggatttgcactctggccttggcccggcacttg
attccaggcctggacagctacagccagtccgccctgatctatcacattgatcgcgccaac
gcccgcgagcgcctgcgcaatgcgcacagcgccttggccgatgtacgtaattgcctggca
ctcctgcaatacttgctgggcctgacgcaaaacatcaatacctgggaacagttgtggcag
ctctccgagcacgcccggattcccaccattttgcattttggcaaacacaagggcatggcc
attgccgatgtaccacaggactacaagaactggttgctgcgtcaaccagacctggatccc
tatctggtcaaggccttgaaggtctaa
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