Alistipes sp. dk3624: GFH31_04280
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Entry
GFH31_04280 CDS
T06260
Name
(GenBank) DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
ald
Alistipes sp. dk3624
Brite
KEGG Orthology (KO) [BR:
ald00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ald03032
]
GFH31_04280
03036 Chromosome and associated proteins [BR:
ald03036
]
GFH31_04280
03400 DNA repair and recombination proteins [BR:
ald03400
]
GFH31_04280
DNA replication proteins [BR:
ald03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
GFH31_04280
Chromosome and associated proteins [BR:
ald03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
GFH31_04280
DNA repair and recombination proteins [BR:
ald03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
GFH31_04280
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Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
Arteri_nsp7a
DAP_DH_C
Motif
Other DBs
NCBI-ProteinID:
QGA23120
LinkDB
All DBs
Position
complement(1017904..1018176)
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AA seq
90 aa
AA seq
DB search
MNKSQLVDAIARNAKITKVDAKKALDAFIEVTGETLRSGDKIVLVGFGSFSVAKKPERTG
RNPRTGAAIRIAPRNVVKFRAGAELSDMLK
NT seq
273 nt
NT seq
+upstream
nt +downstream
nt
atgaataaatctcaactcgttgacgccattgcgcgaaatgcaaaaattacgaaagtcgat
gccaaaaaagcgctcgacgcgttcattgaagtgaccggcgaaacgttgcggtcgggcgac
aagatcgtactggtcggtttcggatcgttctcggtggctaaaaagccggaacgtacggga
cgcaatccccgaacgggggcggctatccggatcgccccgcggaatgtggtcaaattcaga
gccggtgcagaattgagcgatatgctgaaataa
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