KEGG   Alistipes sp. dk3624: GFH31_04785
Entry
GFH31_04785       CDS       T06260                                 
Name
(GenBank) RNA polymerase sigma-70 factor
  KO
K23514  RNA polymerase sigma-19 factor, ECF subfamily
Organism
ald  Alistipes sp. dk3624
Pathway
ald02020  Two-component system
Brite
KEGG Orthology (KO) [BR:ald00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    GFH31_04785
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ald03021]
    GFH31_04785
Transcription machinery [BR:ald03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     GFH31_04785
SSDB
Motif
Pfam: Sigma70_r2 Sigma70_r4_2 Sigma70_r4 Sigma70_ECF PF0610-like_N GerE HTH_40 HTH_10 PhyR_sigma2 RPA HTH_5 HTH_20 HTH_38 HTH_Crp_2 Arm-DNA-bind_1
Other DBs
NCBI-ProteinID: QGA23207
LinkDB
Position
1133696..1134298
AA seq 200 aa
MNKDLTWNASDNKDRESTERTSRENGPVTVELLEALRDGDHEAYKTVYLHYRGPIENFLY
KLLRSREEAEEIAQHVFMTLWERRAELDPSKNIRTLLYTIARNAVVNLFKRQRVFEKYQK
MQDPGEQDLLTGEDLLIAQEKELLIELAVKNMPPMRRKIFEMSRQQNLSHEEIAQHLDTS
KHNVANHLSQALKKIKRTLK
NT seq 603 nt   +upstreamnt  +downstreamnt
atgaataaagatttaacctggaacgcctctgataataaagatcgggaatcgaccgaacga
acatcccgcgaaaacgggcccgttacggtggaactgctcgaagcgctccgcgacggggat
cacgaggcctacaagaccgtatacctgcattaccggggcccgatcgagaactttctatat
aaattgttgcgctcccgcgaagaagccgaggaaatcgcgcagcacgtatttatgaccctg
tgggagaggcgggccgagttggacccttccaaaaatatccgtaccctactctatacgatc
gcacggaatgcggtggtcaatttgttcaaacgccagcgggttttcgagaaataccagaaa
atgcaggaccccggcgaacaggatcttctgacaggcgaagacctgttgatcgcgcaggaa
aaagaactactcatagagctggccgtcaagaacatgcctccgatgcgccggaaaatattc
gaaatgagccggcagcagaacctctcgcacgaagagatcgcgcagcaccttgatacgtcc
aaacacaatgtcgcgaaccacctgtcgcaagccctgaaaaaaatcaagcgcacgctcaaa
tag

DBGET integrated database retrieval system