Alistipes sp. dk3624: GFH31_04785
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Entry
GFH31_04785 CDS
T06260
Name
(GenBank) RNA polymerase sigma-70 factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
ald
Alistipes sp. dk3624
Pathway
ald02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
ald00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
GFH31_04785
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ald03021
]
GFH31_04785
Transcription machinery [BR:
ald03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
GFH31_04785
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4_2
Sigma70_r4
Sigma70_ECF
PF0610-like_N
GerE
HTH_40
HTH_10
PhyR_sigma2
RPA
HTH_5
HTH_20
HTH_38
HTH_Crp_2
Arm-DNA-bind_1
Motif
Other DBs
NCBI-ProteinID:
QGA23207
LinkDB
All DBs
Position
1133696..1134298
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AA seq
200 aa
AA seq
DB search
MNKDLTWNASDNKDRESTERTSRENGPVTVELLEALRDGDHEAYKTVYLHYRGPIENFLY
KLLRSREEAEEIAQHVFMTLWERRAELDPSKNIRTLLYTIARNAVVNLFKRQRVFEKYQK
MQDPGEQDLLTGEDLLIAQEKELLIELAVKNMPPMRRKIFEMSRQQNLSHEEIAQHLDTS
KHNVANHLSQALKKIKRTLK
NT seq
603 nt
NT seq
+upstream
nt +downstream
nt
atgaataaagatttaacctggaacgcctctgataataaagatcgggaatcgaccgaacga
acatcccgcgaaaacgggcccgttacggtggaactgctcgaagcgctccgcgacggggat
cacgaggcctacaagaccgtatacctgcattaccggggcccgatcgagaactttctatat
aaattgttgcgctcccgcgaagaagccgaggaaatcgcgcagcacgtatttatgaccctg
tgggagaggcgggccgagttggacccttccaaaaatatccgtaccctactctatacgatc
gcacggaatgcggtggtcaatttgttcaaacgccagcgggttttcgagaaataccagaaa
atgcaggaccccggcgaacaggatcttctgacaggcgaagacctgttgatcgcgcaggaa
aaagaactactcatagagctggccgtcaagaacatgcctccgatgcgccggaaaatattc
gaaatgagccggcagcagaacctctcgcacgaagagatcgcgcagcaccttgatacgtcc
aaacacaatgtcgcgaaccacctgtcgcaagccctgaaaaaaatcaagcgcacgctcaaa
tag
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