Alistipes sp. dk3624: GFH31_05370
Help
Entry
GFH31_05370 CDS
T06260
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
ald
Alistipes sp. dk3624
Pathway
ald00300
Lysine biosynthesis
ald00470
D-Amino acid metabolism
ald01100
Metabolic pathways
ald01110
Biosynthesis of secondary metabolites
ald01120
Microbial metabolism in diverse environments
ald01230
Biosynthesis of amino acids
Module
ald_M00526
Lysine biosynthesis, DAP dehydrogenase pathway, aspartate => lysine
ald_M00527
Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
ald00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
GFH31_05370 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
GFH31_05370 (lysA)
Enzymes [BR:
ald01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
GFH31_05370 (lysA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
QGA23312
LinkDB
All DBs
Position
1273748..1274905
Genome browser
AA seq
385 aa
AA seq
DB search
MSARNYIKQLAELPTPFYFYDMELLNRTLNKATEASSRYGYKIHYALKSNFDPRIVEAVR
RAGMGMDCVSGNEVRMAVENGFAASEIVFAGVGKTDREIEYALGQEIFSFNCESLHELQV
INEIAGRMGKKARIALRINPDVDPKTHRYITTGKADNKFGISYDEIDAAIASLEKLANLE
IVGLHFHIGSQIRDMQVFETFSKRVFDIKEWFREKGIVLKHLNMGGGLGIDYDDPDREPM
PDFETYFDIFHRNLKIDEGQTVHFELGRSLVAQCGELITRALYNKETSAGTKIVIVDAGM
TDLIRPALYGAKHKIENLTSATGSEKYTIGGPICESSDIFGRDVELPVTSRGDLLTLRSA
GAYGMAMASRYNLQDLPGAVYSDKL
NT seq
1158 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcacgaaattacatcaaacagttagcggaactgcccacgccgttctatttttac
gacatggaactgctaaaccgcacactgaacaaggcgaccgaagcgtcatcgcgttacggc
tataaaatacattacgcgctgaaatcgaacttcgacccgcgcatcgtcgaagccgtgcgc
cgcgccggcatgggcatggactgcgtcagcggcaacgaggtgcggatggccgtcgaaaac
gggtttgcggcatcggagatcgtattcgccggcgtcggcaaaaccgaccgggagatcgaa
tacgcgctcggccaggaaatcttctcgttcaactgcgaatcgttgcacgaattgcaagtc
atcaacgaaatcgccggacgaatgggcaaaaaggcgcgaatcgcgcttcggatcaacccc
gatgtcgatccgaaaacgcaccgctacatcaccaccggcaaagcggataacaaattcggc
atctcgtacgacgaaatcgacgcggcgatcgcttcgctcgaaaaactcgcaaacctcgaa
atcgtcgggctgcacttccacatcggctcgcagatccgcgatatgcaggtgttcgaaacg
ttcagcaaacgggtattcgacatcaaggagtggttccgcgaaaagggcatcgttttgaaa
cacctcaacatgggcggcggactcggcatcgactacgacgaccccgaccgggaaccgatg
cccgacttcgaaacctatttcgacatcttccaccgcaacctgaaaatcgacgaaggccag
accgtgcatttcgaactgggccgctcgctggtcgcgcagtgcggcgaattgattacgcgc
gcgctttacaacaaagaaacgtcggccggtacgaagatcgtgatcgtcgacgcaggaatg
accgacctgatccggccggccctgtacggcgcgaaacacaagatcgaaaacctgacttcc
gcgaccgggagcgaaaaatatacgatcggcggcccgatctgcgaatcgtcggatattttc
ggccgcgacgtcgaactgccggtcacctcgcgcggagacctgctgacgctgcgttcggca
ggggcttacggcatggcgatggcatcgcgctacaatctgcaggatctgcccggagccgta
tacagcgataaactataa
DBGET
integrated database retrieval system