Alistipes sp. dk3624: GFH31_07665
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Entry
GFH31_07665 CDS
T06260
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
ald
Alistipes sp. dk3624
Pathway
ald03030
DNA replication
ald03430
Mismatch repair
ald03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ald00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
GFH31_07665
03430 Mismatch repair
GFH31_07665
03440 Homologous recombination
GFH31_07665
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ald03032
]
GFH31_07665
03400 DNA repair and recombination proteins [BR:
ald03400
]
GFH31_07665
Enzymes [BR:
ald01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
GFH31_07665
DNA replication proteins [BR:
ald03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
GFH31_07665
DNA repair and recombination proteins [BR:
ald03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
GFH31_07665
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNAX_ATPase_lid
AAA
DNA_pol3_gamma3
RuvB_N
AAA_22
RCF1-5-like_lid
AAA_5
AAA_30
AAA_14
TIP49
AAA_16
AAA_2
AAA_19
Rad17
Mg_chelatase
AAA_24
AAA_assoc_2
AAA_18
RNA_helicase
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
QGA23719
LinkDB
All DBs
Position
complement(1795666..1797537)
Genome browser
AA seq
623 aa
AA seq
DB search
MDNFIVSARKYRPATFASVVGQSHITSTLKNAISRRQLAHAYLFCGPRGVGKTTCARIFA
KAINCLNPGPDAEACNECESCRAFNEGRSFNIHELDAASNNSVDDIRNLTDQVRIPPQIG
RYSVYIIDEVHMLSVQAFNAFLKTLEEPPAHAVFILATTEKHKIIPTILSRCQIYDFNRI
RVEDGVEYLKYIASQEGVTYDDESLHLIARKADGGMRDALSMFDKVVSFCGQNLTVAQVA
ATLNVLDYDTYFTIAEQILAGDYTNALLLFDEVLRKGFSGQTFVAGLNSHFRDLLMCKNP
QTLPLLEVTGSVAERYRTQAAQCPVPLLFEGINLLTAVDASLRTATNQRLHVELGLMKLC
GLGQKKNDEALTPSLPDLGGSRNVPDGSARQPAPAAATVVPPRDGQPSSALAGTAAEKPD
PGRETRKPVSPVPVASPPASAVSQSRPAGKAEPGPSRPAPTTGGVSLSGRSILSLLNTSR
PAAPVSGDADPAEDPENLPDADEAVEEDVESRLQQGCELLTRELLAERPRLGIAFQDVSI
RGNRILLKVPNESLYDEVTNHLTDIRKRLCDLGDVRSAIEFQVEISENKAGLKPIKVEDR
LRYLTEKNPLVAKLRRDLDLDIE
NT seq
1872 nt
NT seq
+upstream
nt +downstream
nt
atggataatttcatcgtatcggcccggaaataccgtccggcgaccttcgcatcggtcgtc
ggacagtcgcatattacctcgacgctgaagaatgcgatcagccgtcgccagttggcgcat
gcgtacctgttctgcgggccgcgcggcgtcggcaagacgacttgcgcgcggatcttcgcc
aaagcgatcaactgcctgaatccggggcccgacgccgaagcctgcaacgagtgcgaatcg
tgccgtgcgttcaacgagggccggtcgttcaatatccacgaactggacgccgcgtcgaac
aactcggtggacgatatccgcaacctgaccgaccaggtgcgtatcccgccgcagatcggt
cgttacagcgtctatatcatcgacgaggtgcacatgctgtcggtgcaggcgttcaacgcg
tttctgaaaacgctcgaagagccgcccgcacatgccgtgtttatcttggctacgaccgaa
aagcacaagatcattccgacgatcctgtcgcgctgtcagatttacgatttcaaccggatt
cgcgtcgaggacggcgtggagtacctcaaatacatcgcttcgcaggaaggagtgacctac
gacgacgagtcgctgcacctgatcgcccgtaaggccgacggcggaatgcgcgacgcgctg
tcgatgttcgacaaggtggtttcgttctgcgggcagaatctgacggtcgcccaggtggcc
gcgacgctcaacgtgctcgattacgatacctattttacgatcgccgaacagatcctggcc
ggagactatacgaacgctttgctgcttttcgacgaggtgttgcgcaagggtttttccgga
cagactttcgtggcggggctgaacagccatttccgcgacctgctgatgtgcaagaatccg
cagacgttgccgctgcttgaggtgacgggcagcgtggccgaacgttaccggacgcaggcc
gcacaatgtccggtgccgctgctgttcgaggggatcaatctgctgacggcggtcgacgcg
tcgctgcggacggctaccaaccaacgattgcatgtcgaactgggtctgatgaaactttgc
ggactcggtcaaaaaaaaaatgacgaagccctgacgccgtcgctgcccgatctgggcggt
tcccggaacgttccggacggttccgcgcgacagcctgcgccggccgcagcgaccgtagtc
ccgccgcgggacggacaaccgtcgtcggcacttgccgggactgctgcggaaaaaccggat
cccggccgcgaaacccgtaagccggtttcccctgttcctgttgcttcgccgcctgcgtcg
gccgtttcgcagtcccgccccgccggaaaagccgaaccggggccgtcccgtcccgcgccg
acgacggggggcgtttcgctgtccggccgttcgatcctgtcgttgctgaatacgagccgc
cccgccgcgcccgtttcgggagatgccgatccggcggaagatccggagaacctgcccgat
gcggatgaagcggtcgaagaggatgtcgaatcccgtttgcaacagggatgcgaattgctg
acccgcgaattgcttgcggagcggccccggctggggatcgcgttccaggatgtcagcata
cgcgggaaccggattcttctgaaagtgccgaacgaatcgctgtacgacgaggtgaccaat
cacctgaccgatatccgcaaacggctttgcgacttgggcgatgtccgctcggcgattgaa
tttcaggtcgagatcagcgaaaacaaggccggcctgaaaccgatcaaagtcgaagaccgg
ctgcgttacctgaccgaaaaaaatccgctggtcgccaaactccgtcgcgacctcgacctc
gatatcgaatag
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