Alistipes sp. dk3624: GFH31_08085
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Entry
GFH31_08085 CDS
T06260
Name
(GenBank) RagB/SusD family nutrient uptake outer membrane protein
KO
K21572
starch-binding outer membrane protein, SusD/RagB family
Organism
ald
Alistipes sp. dk3624
Brite
KEGG Orthology (KO) [BR:
ald00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ald02000
]
GFH31_08085
Transporters [BR:
ald02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
GFH31_08085
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SusD_RagB
SusD-like_3
Motif
Other DBs
NCBI-ProteinID:
QGA23790
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All DBs
Position
1914687..1916522
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AA seq
611 aa
AA seq
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MKKHIYLLFAAFVAGGLSSCKDALDLPDDGRISYESIWSDRNRTIGYLNTCYNYVSGPSF
GVISYTDDAQDAYDYMANSGVTYWYSGLVSATSWPLGGSWSNAFVGIRYCNVFIQALPNA
TAYAQEEEKKGWIAQAQALRAYYYLTLIREYGGVPLITEPYSYDHDFSSDRRAKVWEIVK
QILQDTDDALAAPGAEDMSYTSKGFRWVLGSNYANMMHRALAYAIRSEAIMLAVSPLHAN
EEGNPYTWEDAARITKEALDQCLAHDYSLFTRLPVVQTDSKGAYDYYFFTPYDYDRTSDK
ETIYGVAGISVWNYYGLPTNSRQSSAGISPTQELIDSYETADGHPILKKTGDGKYYKDDS
HLQPNFNEAAGYDDQNPYENRDPRFYQSVYFNGAQRHWDDPDELVKIYDNAPRDSSCAID
KTTIRNTRTGYYMRKYDKHTSSYETPVTGYVRRFRLAELYLNFAEAANEAYGPTQQVEGY
SGQASMSAIEAVNAVRTRADMPNVRDEYTTDRDVFRDRIWNERRVEFAFEPLRFYDIRRW
KILDEAETVVTGMRATKNDSDGTFTYKRFVVSERKSNADTYLLFPLPTDEVNKMYKLTGT
NWQNPGYESPE
NT seq
1836 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaacatatatatcttctttttgcagcatttgttgccggagggctttcctcttgc
aaggatgcactcgatctgccggatgacggacgtatcagttacgagagtatctggtcggat
cggaacagaacgatcggttatctgaatacttgctataattacgtttccggtccgagcttt
ggagtgatatcttatacggacgatgcgcaggacgcatatgattacatggcgaattccgga
gttacttactggtactctggtttggtcagtgcgacttcatggccgctgggaggatcttgg
agtaatgcatttgtcgggatccgttattgtaacgtttttattcaggcattgccgaatgcg
accgcctatgcccaggaggaggaaaagaaaggttggatcgctcaagcccaggcattacgc
gcttattattatttgacgctgatcagggagtatggcggcgttccgttgattacggagcct
tattcttatgatcacgatttttcttccgacaggcgtgctaaagtttgggaaatcgttaag
cagattctacaggataccgatgatgctcttgcagctccgggagccgaggatatgtcttat
acgagtaaaggattccgttgggtattgggctcgaactatgccaatatgatgcaccgcgca
ttagcctatgcgatccgttcggaagcgattatgctggccgtaagtccgctccacgctaat
gaagaaggaaatccttatacttgggaagatgccgctagaattacgaaggaagcgctcgac
caatgtctggctcacgattattctttgtttacccgtctgccggtcgtccagaccgattcg
aagggcgcctatgattattatttcttcactccgtacgattatgaccgtacgagtgataag
gaaacgatttatggagttgccggtatttcggtttggaattattacggtcttccgactaat
tccaggcagtcttctgccggaatcagtccgactcaggagttgattgactcttatgaaacg
gccgatggacacccgattcttaagaaaactggggatggcaaatattataaagatgactct
catttgcaaccgaacttcaatgaagctgccggatacgacgatcagaatccttatgagaac
cgcgatccccgtttctatcaatccgtttatttcaatggggcacagcgtcattgggacgat
ccggacgaacttgtgaagatttatgacaatgcgccgagagacagttcctgcgcaattgat
aaaacgaccattcggaatacgagaacgggttattacatgagaaagtacgacaaacatact
tcatcttatgaaacacctgttaccggatatgtacggagattccggttagcagagctttat
ctgaacttcgcagaagcggccaatgaagcttatggcccgactcagcaggtagaaggatat
agcgggcaggcttccatgtctgccatagaggcagtcaatgcagtccgtacgagagccgat
atgccgaatgttagggatgaatatactacggatagagatgtgttcagggacaggatctgg
aatgaacgtcgggtagaattcgcttttgaaccgcttcgtttctacgatattcggcgttgg
aagatccttgacgaagcagagacggtcgtaacgggtatgcgggcgaccaagaacgatagt
gacggtacgtttacttataaacggttcgttgtcagcgaacgcaaatcgaatgcggatact
tatctgcttttcccgttgcctacggacgaagtgaataagatgtataaacttaccgggacg
aactggcagaatccgggctacgaatctcccgaataa
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