Alistipes sp. dk3624: GFH31_08225
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Entry
GFH31_08225 CDS
T06260
Symbol
priA
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
ald
Alistipes sp. dk3624
Pathway
ald03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ald00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
GFH31_08225 (priA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ald03400
]
GFH31_08225 (priA)
Enzymes [BR:
ald01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
GFH31_08225 (priA)
DNA repair and recombination proteins [BR:
ald03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
GFH31_08225 (priA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
DEAD
Zn_ribbon_PriA
PriA_C
ResIII
Helicase_C
AAA_30
nSTAND3
AAA_19
Zn_ribbon_6
IstB_IS21
AAA_16
SLFN-g3_helicase
TsaE
PhoH
PyrI_C
AAA_22
AAA_33
ATPase
AAA_7
Trm112p
Zn_Ribbon_TF
Motif
Other DBs
NCBI-ProteinID:
QGA24755
LinkDB
All DBs
Position
complement(1940468..1942687)
Genome browser
AA seq
739 aa
AA seq
DB search
MTFAVPDAMLRQIVPGCRVIVQLGARKYYTGIVDRLHGQRPPFDRIKPVGRIADAEPVAT
AEQLRLWHWLSEYYMCPLGMVLRAALPAGLKSDGFSEDETFGRGYMQPRQTVVSLHPDIR
NEERLHVALDSLSRAKSQYKALLEYLEKTGNPDFGAPIEIPRKRLSAPTAILKALAEKGF
IRIADTEIPASDAPAAPDKLPELSAAQTAAYEQIKTCFSEKEVVLLHGVTGSGKTEIYIR
LMAEALAAGHNVLYMLPEIALTAQLIRRMESYFGKAVTVYHSRLSDNRRAAVYHELLRCD
GGRIVIGVRSSVLLPLRNLSLVIVDEEHDTSFKQTDSAPRYHGRDTAVVLASVCGAKVLL
GSATPCAESFHNAVTGKYGHVVLSERYGGVTLPQVIVSDTLRAAKRGEKYSHFNKILLDQ
IDRTLQRGRQAMLFQNRRGFSPYVECGHCGWTGVCPDCNVSLTYHKNDGTLRCHYCGYHM
PIPKTCPSCGTGELLPQGFGTEKIEEELAAIFPQAAIERLDADTARSSRNYRRIIASFEQ
RKTDILVGTQIITKGFDFGGVALVGILNADNMLNYPDFRAGERAFQMMMQVGGRAGRREE
QGTVVIQTAQPEHPVVRQARDSDYDAMIRSQLAERRAFFYPPFCRLIAVLLRHRDHALLW
KAAAAFGTEARTRFGRRLLGPEPPAVDRIRGQFRLQFLLKIEKQLPVAAVKKELSGLFDR
LHAVPEFRPVDIVVDVDPQ
NT seq
2220 nt
NT seq
+upstream
nt +downstream
nt
atgactttcgccgtcccggacgcgatgctgcggcagatcgtgccgggctgccgggtgatc
gtccaactgggagcccggaaatactacaccgggatcgtcgaccggctgcacggccagcgg
ccgcctttcgaccggatcaaaccggtcgggcggatcgcggacgcggaacccgtcgccacg
gcggaacaactgcggctgtggcattggctgtcggaatattacatgtgtccgttgggaatg
gtactgcgggcggcgctgccggccggcctgaaatccgacggtttttcggaggacgagacg
ttcggccgcggctacatgcagccgcggcaaacggtcgtttcgctgcatccggacatccgc
aatgaggaacggctgcacgtcgcgctggattccctgtcgcgcgcgaaatcccagtacaaa
gccctgctggaatacctcgaaaaaaccgggaatcccgacttcggcgcaccgatcgaaatt
ccgcgcaaacggctttcggctccgaccgcgatcctcaaagcgttggccgaaaaaggattt
atccggatcgccgataccgaaatcccggcatcggacgcgcccgccgcgccggacaaactg
cccgaactttcggcagcgcaaacggcggcctacgagcagatcaaaacctgtttttcggag
aaagaggtcgtcctgctgcacggggtaaccggcagcggcaagaccgaaatctacatccgg
ctgatggccgaagcgctggcagccgggcacaacgtgctgtacatgctgcccgaaatcgcg
ttgaccgcacaactgatccggcgcatggaaagctatttcggaaaagccgtcacggtctac
cattcgcggctgagcgacaaccgccgagccgccgtctaccacgaactgctgcgctgcgac
ggcggacggatcgtgatcggcgtgcgctcgtcggtactgctgccgctgcgcaacctgtcg
ctggtaatcgtcgacgaggagcacgacaccagcttcaagcagaccgactcggcccctcgc
taccacggccgcgacaccgccgtggtgctggcatccgtctgcggcgccaaagtgctgctc
ggcagcgcgacgccctgcgccgaatcgttccacaatgcggtaaccggcaaatacggacac
gtcgtgctctcggaacgctacggcggagtcacgctgccgcaggtgatcgtgtcggacacg
ctgcgcgccgccaaacgcggcgaaaagtactcgcatttcaacaaaatcctgctcgatcag
atcgaccggacgctgcaacggggtcgtcaggcaatgctgttccagaaccggcggggattc
tcgccgtatgtcgagtgcgggcattgcggctggacgggcgtctgccccgactgcaacgtt
tcgctgacctaccataaaaacgacggaacgctgcgctgccactactgcggctaccacatg
ccgatcccgaaaacctgtccgtcgtgcggaaccggcgaactgcttccgcaaggcttcggc
accgaaaaaatcgaagaggaactggcggcgatctttccgcaggccgcgatcgaacggctc
gacgccgacaccgcgcgttcgtcgcgcaactaccggcgcatcatcgcttcgttcgaacag
cgtaaaacggacatcctggtcgggacacaaatcatcacgaaagggttcgatttcggcggc
gtcgcgttggtcggcatcctgaacgccgacaacatgctgaattacccggatttcagggcc
ggggagcgggctttccagatgatgatgcaggtcggcggacgcgccggacgccgcgaagag
cagggaacggtcgttatccagaccgcccagcccgaacacccggtcgttcggcaggcgcgc
gacagcgactacgatgcgatgatccgctcgcaactggccgaacgccgcgcctttttttac
ccgcccttctgccggttgatcgccgtcctgctgcgccatcgcgatcacgctttgctatgg
aaagcggctgcggcgttcgggacggaagcgcgcacccggttcggccgccggctgctcggc
cccgaaccgcccgcagtagatcggatacgcggacaattccggttgcagttcctattgaaa
atcgaaaagcagttgccggtcgccgccgtgaaaaaagagttgtccggacttttcgatcgg
ttgcatgccgtgccggaattccggccggtcgacatcgtcgtagacgtagacccgcaatag
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