Alistipes sp. dk3624: GFH31_08625
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Entry
GFH31_08625 CDS
T06260
Name
(GenBank) integration host factor subunit beta
KO
K03530
DNA-binding protein HU-beta
Organism
ald
Alistipes sp. dk3624
Brite
KEGG Orthology (KO) [BR:
ald00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ald03032
]
GFH31_08625
03036 Chromosome and associated proteins [BR:
ald03036
]
GFH31_08625
03400 DNA repair and recombination proteins [BR:
ald03400
]
GFH31_08625
DNA replication proteins [BR:
ald03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
GFH31_08625
Chromosome and associated proteins [BR:
ald03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
GFH31_08625
DNA repair and recombination proteins [BR:
ald03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
GFH31_08625
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_1
HU-CCDC81_euk_2
HU-CCDC81_bac_2
RuBisCO_activase_AAA_helical
FliG_N
KORA
PqqD
TrmB
HU-CCDC81_bac_1
Motif
Other DBs
NCBI-ProteinID:
QGA23886
LinkDB
All DBs
Position
complement(2032257..2032541)
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AA seq
94 aa
AA seq
DB search
MTKADIVNEIAKSTGVEKAQVQQIVESFMESIKDSLTANKNVYLRGFGSFIVKKRAEKVA
RNISKNTTITIPAHNIPAFKPAKSFAGKVKANTK
NT seq
285 nt
NT seq
+upstream
nt +downstream
nt
atgactaaggcggacatcgttaatgaaatcgcaaaaagcacgggcgtcgaaaaggcgcag
gtgcagcagatcgtggaatctttcatggaaagcatcaaagattcgctgacggccaataag
aacgtatacctgagaggtttcggcagcttcatcgttaagaaaagagctgaaaaagtagcc
cgtaacatctcgaaaaatacgacgatcacaattcctgcccacaacatcccggcgttcaaa
ccggccaagagctttgcgggcaaggtgaaagctaacaccaaatag
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